Top 10 genes with highest correlation to Rv1634/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0492c/- | (cc=0.5131) | info on Rv0492c/- |
| Rv2031c/hspX | (cc=0.4971) | info on Rv2031c/hspX |
| Rv2265/- | (cc=0.4764) | info on Rv2265/- |
| Rv2693c/- | (cc=0.4685) | info on Rv2693c/- |
| Rv1140/- | (cc=0.455) | info on Rv1140/- |
| Rv3433c/- | (cc=0.4428) | info on Rv3433c/- |
| Rv0344c/lpqJ | (cc=0.44) | info on Rv0344c/lpqJ |
| Rv2030c/- | (cc=0.4282) | info on Rv2030c/- |
| Rv2340c/PE_PGRS39 | (cc=0.4236) | info on Rv2340c/PE_PGRS39 |
| Rv1745c/idi | (cc=0.415) | info on Rv1745c/idi |
Correlation of Rv1634/- with Rv2340c/PE_PGRS39
Normalized LFCs for Rv1634/-:
(description and provenance of datasets)
| Rv1634/- | Rv2340c/PE_PGRS39 | |
| Fe_supp_jason_reseq | 0.385 | -0.063 |
| low_pH_jason_reseq | -0.761 | -0.452 |
| NO_jason_reseq | 0.391 | -0.417 |
| B6_jason_reseq | -0.282 | 0.657 |
| MHCII_jason_reseq | 0.184 | 0.619 |
| Isoniazid02 | 1.455 | 1.157 |
| Rifampicin4 | 0.133 | 0.485 |
| Ethambutol3 | 1.115 | 1.549 |
| Meropenem3 | 0.253 | 0.728 |
| Vancomycin16 | 0.215 | 0.061 |
| Rv2680_day32 | 1.267 | -0.465 |
| H37Rv_KO_MarP | -0.034 | -0.302 |
| hypoxia_3wks | -2.129 | -0.774 |
| hypoxia_6wks | -1.796 | -0.666 |
| glycerol | 0.856 | 0.65 |
| cholesterol | 0.866 | 0.315 |
| AJ | -0.027 | 0.565 |
| Bibs02 | -0.114 | 0.984 |
| Bibs02c | 0.711 | 0.679 |
| BL6 | 0.005 | -0.16 |
| BL6a | 0.376 | 0.014 |
| BXD01 | -0.081 | -0.58 |
| BXD010 | -0.458 | -0.687 |
| BXD011 | -0.415 | -0.737 |
| BXD03 | -0.021 | -0.566 |
| BXD04 | 0.099 | 0.035 |
| BXD05 | -0.079 | -0.068 |
| BXD06 | -0.323 | -0.939 |
| BXD07 | 0.016 | -0.624 |
| BXD08 | -0.046 | -0.277 |
| BXD09 | -0.193 | -0.626 |
| CAST | -0.514 | 0.794 |
| CCcont | -0.457 | -0.278 |
| DS01 | 0.493 | 0.956 |
| DS02 | 1.267 | 0.993 |
| DS04 | 0.476 | 0.45 |
| DS0c | 0.952 | 0.94 |
| GP01 | 0.313 | -0.24 |
| GP02 | 0.04 | 0.643 |
| GP0c | 0.357 | -0.111 |
| NOD | 0.075 | -0.218 |
| NZO | -0.257 | 0.48 |
| PWK | -0.304 | 0.672 |
| H37Rv_KO_CtpC | 0.83 | -0.891 |
| H37Rv_KO_CtpD | 0.37 | -0.009 |
| H37Rv_KO_Rv1272 | 0.626 | 0.232 |
| H37Rv_KO_SugABC | 0.873 | 0.386 |
| H37Rv_KO_MbtN | 0.205 | 0.239 |
| Trans05 | 0.7 | 0.28 |
| macrophage_unactivated | 0.489 | -1.004 |
| IL1 | -0.475 | -0.736 |
| Rapamycin | -0.451 | -0.62 |
| Tcell | -0.818 | -0.978 |
| GMCSF | 0.494 | -0.747 |
| IFNab | -0.342 | -0.429 |
| IFNg | -0.267 | -0.526 |
| IFNg_GMCSF1 | -0.019 | -0.154 |
| Rv1432_day32 | 0.086 | 0.352 |
| Rv1565c_day32 | 1.668 | 0.051 |
| secA2_input | -0.487 | 0.512 |
| delta_Rv3594 | 0.057 | -0.207 |
| delta_Rv3717 | 0.424 | -0.44 |
| delta_Rv3811 | -0.144 | -0.007 |
| delta_Rv0954 | -0.287 | 0.172 |
| PonA1 | 0.255 | -0.128 |
| EccD1_KO | 0.076 | 0.697 |
| EspI_KO | -0.051 | 0.211 |
| PE35_KO | -0.613 | 0.117 |
| PPE68_KO | -0.637 | 0.038 |
| glycerol2 | -0.332 | -0.041 |
| lignocerate | 0.142 | 0.516 |
| oleate | 0.625 | 0.0 |
| phosphatidylcholine | 0.253 | 0.494 |
| acetate | -0.512 | 0.116 |
| glucAc | -0.368 | 0.086 |
| Rv0950ko | 0.461 | 0.555 |
| Rv1096ko | 0.03 | -0.537 |
| Rv3684ko | -0.262 | -0.442 |
| delta_otsA_trehalose | -1.008 | -0.722 |