Top 10 genes with highest correlation to Rv1634/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0492c/- | (cc=0.5131) | info on Rv0492c/- |
| Rv2031c/hspX | (cc=0.4971) | info on Rv2031c/hspX |
| Rv2265/- | (cc=0.4764) | info on Rv2265/- |
| Rv2693c/- | (cc=0.4685) | info on Rv2693c/- |
| Rv1140/- | (cc=0.455) | info on Rv1140/- |
| Rv3433c/- | (cc=0.4428) | info on Rv3433c/- |
| Rv0344c/lpqJ | (cc=0.44) | info on Rv0344c/lpqJ |
| Rv2030c/- | (cc=0.4282) | info on Rv2030c/- |
| Rv2340c/PE_PGRS39 | (cc=0.4236) | info on Rv2340c/PE_PGRS39 |
| Rv1745c/idi | (cc=0.415) | info on Rv1745c/idi |
Correlation of Rv1634/- with Rv0344c/lpqJ
Normalized LFCs for Rv1634/-:
(description and provenance of datasets)
| Rv1634/- | Rv0344c/lpqJ | |
| Fe_supp_jason_reseq | 0.385 | -0.603 |
| low_pH_jason_reseq | -0.761 | -0.412 |
| NO_jason_reseq | 0.391 | 0.37 |
| B6_jason_reseq | -0.282 | 0.456 |
| MHCII_jason_reseq | 0.184 | -0.746 |
| Isoniazid02 | 1.455 | 0.105 |
| Rifampicin4 | 0.133 | 0.222 |
| Ethambutol3 | 1.115 | 0.472 |
| Meropenem3 | 0.253 | 0.709 |
| Vancomycin16 | 0.215 | 1.571 |
| Rv2680_day32 | 1.267 | 0.027 |
| H37Rv_KO_MarP | -0.034 | 0.763 |
| hypoxia_3wks | -2.129 | -5.802 |
| hypoxia_6wks | -1.796 | -1.706 |
| glycerol | 0.856 | 0.01 |
| cholesterol | 0.866 | -0.504 |
| AJ | -0.027 | -0.148 |
| Bibs02 | -0.114 | -0.685 |
| Bibs02c | 0.711 | -0.994 |
| BL6 | 0.005 | -0.575 |
| BL6a | 0.376 | -0.624 |
| BXD01 | -0.081 | -0.775 |
| BXD010 | -0.458 | -0.561 |
| BXD011 | -0.415 | 0.089 |
| BXD03 | -0.021 | -1.166 |
| BXD04 | 0.099 | 0.012 |
| BXD05 | -0.079 | -1.047 |
| BXD06 | -0.323 | -0.727 |
| BXD07 | 0.016 | -0.445 |
| BXD08 | -0.046 | -0.41 |
| BXD09 | -0.193 | -0.998 |
| CAST | -0.514 | -0.681 |
| CCcont | -0.457 | -1.533 |
| DS01 | 0.493 | -0.539 |
| DS02 | 1.267 | -0.922 |
| DS04 | 0.476 | -0.513 |
| DS0c | 0.952 | -0.966 |
| GP01 | 0.313 | -0.232 |
| GP02 | 0.04 | -0.383 |
| GP0c | 0.357 | -0.259 |
| NOD | 0.075 | 0.085 |
| NZO | -0.257 | 2.076 |
| PWK | -0.304 | -0.593 |
| H37Rv_KO_CtpC | 0.83 | -0.314 |
| H37Rv_KO_CtpD | 0.37 | -0.367 |
| H37Rv_KO_Rv1272 | 0.626 | 0.085 |
| H37Rv_KO_SugABC | 0.873 | -0.501 |
| H37Rv_KO_MbtN | 0.205 | -0.211 |
| Trans05 | 0.7 | -0.111 |
| macrophage_unactivated | 0.489 | -1.341 |
| IL1 | -0.475 | -0.552 |
| Rapamycin | -0.451 | -0.371 |
| Tcell | -0.818 | -1.219 |
| GMCSF | 0.494 | 0.364 |
| IFNab | -0.342 | -1.484 |
| IFNg | -0.267 | -1.312 |
| IFNg_GMCSF1 | -0.019 | -0.723 |
| Rv1432_day32 | 0.086 | -0.692 |
| Rv1565c_day32 | 1.668 | 1.444 |
| secA2_input | -0.487 | 0.366 |
| delta_Rv3594 | 0.057 | 0.489 |
| delta_Rv3717 | 0.424 | -0.025 |
| delta_Rv3811 | -0.144 | -0.217 |
| delta_Rv0954 | -0.287 | 0.149 |
| PonA1 | 0.255 | -0.023 |
| EccD1_KO | 0.076 | 0.737 |
| EspI_KO | -0.051 | 0.847 |
| PE35_KO | -0.613 | -0.3 |
| PPE68_KO | -0.637 | -0.106 |
| glycerol2 | -0.332 | -0.553 |
| lignocerate | 0.142 | -0.32 |
| oleate | 0.625 | 0.068 |
| phosphatidylcholine | 0.253 | -0.277 |
| acetate | -0.512 | -0.352 |
| glucAc | -0.368 | -1.06 |
| Rv0950ko | 0.461 | 0.422 |
| Rv1096ko | 0.03 | 0.998 |
| Rv3684ko | -0.262 | 1.025 |
| delta_otsA_trehalose | -1.008 | -0.517 |