Top 10 genes with highest correlation to Rv1608c/bcpB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1123c/bpoB | (cc=0.4712) | info on Rv1123c/bpoB |
| Rv2631/- | (cc=0.4394) | info on Rv2631/- |
| Rv1938/ephB | (cc=0.4246) | info on Rv1938/ephB |
| Rv3074/- | (cc=0.4185) | info on Rv3074/- |
| Rv1343c/lprD | (cc=0.3899) | info on Rv1343c/lprD |
| Rv0798c/cfp29 | (cc=0.3878) | info on Rv0798c/cfp29 |
| Rv2795c/- | (cc=0.3834) | info on Rv2795c/- |
| Rv2644c/- | (cc=0.381) | info on Rv2644c/- |
| Rv0740/- | (cc=0.3768) | info on Rv0740/- |
| Rv1508A/- | (cc=0.3757) | info on Rv1508A/- |
Correlation of Rv1608c/bcpB with Rv3074/-
Normalized LFCs for Rv1608c/bcpB:
(description and provenance of datasets)
| Rv1608c/bcpB | Rv3074/- | |
| Fe_supp_jason_reseq | 0.254 | -0.12 |
| low_pH_jason_reseq | 0.636 | 0.293 |
| NO_jason_reseq | 0.53 | -0.252 |
| B6_jason_reseq | 1.531 | -0.118 |
| MHCII_jason_reseq | 0.834 | -0.113 |
| Isoniazid02 | 0.086 | 0.332 |
| Rifampicin4 | 0.127 | 1.438 |
| Ethambutol3 | 1.119 | 0.348 |
| Meropenem3 | 0.54 | 0.313 |
| Vancomycin16 | 0.064 | 0.844 |
| Rv2680_day32 | 0.533 | 0.361 |
| H37Rv_KO_MarP | -0.076 | 0.144 |
| hypoxia_3wks | 0.399 | 0.494 |
| hypoxia_6wks | -1.38 | 0.871 |
| glycerol | -0.148 | -0.704 |
| cholesterol | -1.459 | 0.01 |
| AJ | 0.16 | 0.276 |
| Bibs02 | 0.446 | -0.657 |
| Bibs02c | 0.144 | -0.483 |
| BL6 | -0.229 | -0.361 |
| BL6a | -0.222 | -0.121 |
| BXD01 | -0.035 | 0.543 |
| BXD010 | -0.29 | -0.25 |
| BXD011 | 0.189 | -0.098 |
| BXD03 | -0.234 | -0.5 |
| BXD04 | -0.503 | -0.833 |
| BXD05 | -0.882 | 0.195 |
| BXD06 | 0.058 | -0.168 |
| BXD07 | -0.457 | -0.162 |
| BXD08 | -0.085 | 0.219 |
| BXD09 | -0.382 | -0.447 |
| CAST | -0.235 | -0.234 |
| CCcont | -0.081 | 0.117 |
| DS01 | 0.0 | -1.109 |
| DS02 | -1.5 | 0.047 |
| DS04 | 0.474 | -0.396 |
| DS0c | 0.338 | 0.383 |
| GP01 | -0.569 | 0.036 |
| GP02 | -1.315 | -0.884 |
| GP0c | -2.164 | -0.413 |
| NOD | -0.252 | -0.583 |
| NZO | -1.001 | -0.302 |
| PWK | -0.466 | 0.168 |
| H37Rv_KO_CtpC | -0.618 | 0.149 |
| H37Rv_KO_CtpD | 0.951 | -0.128 |
| H37Rv_KO_Rv1272 | 0.012 | -0.226 |
| H37Rv_KO_SugABC | -2.006 | -1.711 |
| H37Rv_KO_MbtN | 0.308 | 0.074 |
| Trans05 | -0.133 | 0.668 |
| macrophage_unactivated | 0.884 | 0.814 |
| IL1 | 0.131 | -0.033 |
| Rapamycin | 1.452 | 0.62 |
| Tcell | -0.349 | 0.658 |
| GMCSF | 0.61 | -0.298 |
| IFNab | 0.302 | -0.033 |
| IFNg | -1.243 | 0.385 |
| IFNg_GMCSF1 | 0.138 | 1.348 |
| Rv1432_day32 | -0.314 | 0.166 |
| Rv1565c_day32 | -1.118 | -0.978 |
| secA2_input | -0.755 | 0.711 |
| delta_Rv3594 | -1.38 | -0.828 |
| delta_Rv3717 | -0.276 | -0.106 |
| delta_Rv3811 | -0.607 | -1.463 |
| delta_Rv0954 | -2.101 | -0.388 |
| PonA1 | -0.366 | -0.139 |
| EccD1_KO | 1.983 | 1.677 |
| EspI_KO | -0.051 | 1.095 |
| PE35_KO | 1.248 | 1.175 |
| PPE68_KO | 1.197 | 1.433 |
| glycerol2 | -1.087 | 0.398 |
| lignocerate | -0.459 | 0.558 |
| oleate | -0.25 | 0.121 |
| phosphatidylcholine | -0.528 | 0.604 |
| acetate | -0.889 | 0.02 |
| glucAc | 0.09 | 0.304 |
| Rv0950ko | 0.359 | -0.103 |
| Rv1096ko | -0.084 | 0.229 |
| Rv3684ko | -1.916 | 0.0 |
| delta_otsA_trehalose | -1.049 | -1.154 |