Top 10 genes with highest correlation to Rv1608c/bcpB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1123c/bpoB | (cc=0.4712) | info on Rv1123c/bpoB |
| Rv2631/- | (cc=0.4394) | info on Rv2631/- |
| Rv1938/ephB | (cc=0.4246) | info on Rv1938/ephB |
| Rv3074/- | (cc=0.4185) | info on Rv3074/- |
| Rv1343c/lprD | (cc=0.3899) | info on Rv1343c/lprD |
| Rv0798c/cfp29 | (cc=0.3878) | info on Rv0798c/cfp29 |
| Rv2795c/- | (cc=0.3834) | info on Rv2795c/- |
| Rv2644c/- | (cc=0.381) | info on Rv2644c/- |
| Rv0740/- | (cc=0.3768) | info on Rv0740/- |
| Rv1508A/- | (cc=0.3757) | info on Rv1508A/- |
Correlation of Rv1608c/bcpB with Rv0740/-
Normalized LFCs for Rv1608c/bcpB:
(description and provenance of datasets)
| Rv1608c/bcpB | Rv0740/- | |
| Fe_supp_jason_reseq | 0.254 | 0.069 |
| low_pH_jason_reseq | 0.636 | 1.802 |
| NO_jason_reseq | 0.53 | 0.774 |
| B6_jason_reseq | 1.531 | 1.02 |
| MHCII_jason_reseq | 0.834 | 0.233 |
| Isoniazid02 | 0.086 | 0.989 |
| Rifampicin4 | 0.127 | 0.087 |
| Ethambutol3 | 1.119 | 1.16 |
| Meropenem3 | 0.54 | 0.688 |
| Vancomycin16 | 0.064 | 0.17 |
| Rv2680_day32 | 0.533 | -1.013 |
| H37Rv_KO_MarP | -0.076 | -0.027 |
| hypoxia_3wks | 0.399 | -1.854 |
| hypoxia_6wks | -1.38 | -1.063 |
| glycerol | -0.148 | -1.09 |
| cholesterol | -1.459 | -0.158 |
| AJ | 0.16 | -0.345 |
| Bibs02 | 0.446 | -0.901 |
| Bibs02c | 0.144 | -0.203 |
| BL6 | -0.229 | 0.712 |
| BL6a | -0.222 | 0.089 |
| BXD01 | -0.035 | 0.428 |
| BXD010 | -0.29 | -0.781 |
| BXD011 | 0.189 | 0.235 |
| BXD03 | -0.234 | 0.197 |
| BXD04 | -0.503 | 0.826 |
| BXD05 | -0.882 | 0.525 |
| BXD06 | 0.058 | 0.031 |
| BXD07 | -0.457 | 0.557 |
| BXD08 | -0.085 | 0.465 |
| BXD09 | -0.382 | -0.218 |
| CAST | -0.235 | 0.566 |
| CCcont | -0.081 | 0.195 |
| DS01 | 0.0 | 0.296 |
| DS02 | -1.5 | 0.147 |
| DS04 | 0.474 | 0.358 |
| DS0c | 0.338 | 0.347 |
| GP01 | -0.569 | -1.157 |
| GP02 | -1.315 | -0.877 |
| GP0c | -2.164 | -0.753 |
| NOD | -0.252 | 0.039 |
| NZO | -1.001 | -1.503 |
| PWK | -0.466 | -0.215 |
| H37Rv_KO_CtpC | -0.618 | -1.662 |
| H37Rv_KO_CtpD | 0.951 | 0.264 |
| H37Rv_KO_Rv1272 | 0.012 | -0.317 |
| H37Rv_KO_SugABC | -2.006 | -0.969 |
| H37Rv_KO_MbtN | 0.308 | -0.706 |
| Trans05 | -0.133 | -0.284 |
| macrophage_unactivated | 0.884 | 1.925 |
| IL1 | 0.131 | 0.406 |
| Rapamycin | 1.452 | 1.178 |
| Tcell | -0.349 | -0.147 |
| GMCSF | 0.61 | 0.689 |
| IFNab | 0.302 | 0.29 |
| IFNg | -1.243 | 1.267 |
| IFNg_GMCSF1 | 0.138 | 3.02 |
| Rv1432_day32 | -0.314 | -0.222 |
| Rv1565c_day32 | -1.118 | -1.579 |
| secA2_input | -0.755 | -1.105 |
| delta_Rv3594 | -1.38 | -1.444 |
| delta_Rv3717 | -0.276 | -0.789 |
| delta_Rv3811 | -0.607 | -1.022 |
| delta_Rv0954 | -2.101 | 0.15 |
| PonA1 | -0.366 | -0.668 |
| EccD1_KO | 1.983 | -0.141 |
| EspI_KO | -0.051 | 0.0 |
| PE35_KO | 1.248 | 0.216 |
| PPE68_KO | 1.197 | 0.186 |
| glycerol2 | -1.087 | -0.129 |
| lignocerate | -0.459 | 0.0 |
| oleate | -0.25 | -1.602 |
| phosphatidylcholine | -0.528 | -0.384 |
| acetate | -0.889 | 0.69 |
| glucAc | 0.09 | 0.868 |
| Rv0950ko | 0.359 | -0.292 |
| Rv1096ko | -0.084 | 0.407 |
| Rv3684ko | -1.916 | -0.183 |
| delta_otsA_trehalose | -1.049 | -0.138 |