Top 10 genes with highest correlation to Rv1608c/bcpB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1123c/bpoB | (cc=0.4712) | info on Rv1123c/bpoB |
| Rv2631/- | (cc=0.4394) | info on Rv2631/- |
| Rv1938/ephB | (cc=0.4246) | info on Rv1938/ephB |
| Rv3074/- | (cc=0.4185) | info on Rv3074/- |
| Rv1343c/lprD | (cc=0.3899) | info on Rv1343c/lprD |
| Rv0798c/cfp29 | (cc=0.3878) | info on Rv0798c/cfp29 |
| Rv2795c/- | (cc=0.3834) | info on Rv2795c/- |
| Rv2644c/- | (cc=0.381) | info on Rv2644c/- |
| Rv0740/- | (cc=0.3768) | info on Rv0740/- |
| Rv1508A/- | (cc=0.3757) | info on Rv1508A/- |
Correlation of Rv1608c/bcpB with Rv1123c/bpoB
Normalized LFCs for Rv1608c/bcpB:
(description and provenance of datasets)
| Rv1608c/bcpB | Rv1123c/bpoB | |
| Fe_supp_jason_reseq | 0.254 | 0.897 |
| low_pH_jason_reseq | 0.636 | -0.882 |
| NO_jason_reseq | 0.53 | 0.42 |
| B6_jason_reseq | 1.531 | 1.537 |
| MHCII_jason_reseq | 0.834 | 1.134 |
| Isoniazid02 | 0.086 | 1.686 |
| Rifampicin4 | 0.127 | -0.596 |
| Ethambutol3 | 1.119 | 1.143 |
| Meropenem3 | 0.54 | -0.108 |
| Vancomycin16 | 0.064 | 0.403 |
| Rv2680_day32 | 0.533 | -0.496 |
| H37Rv_KO_MarP | -0.076 | 0.051 |
| hypoxia_3wks | 0.399 | -0.307 |
| hypoxia_6wks | -1.38 | -0.355 |
| glycerol | -0.148 | -0.481 |
| cholesterol | -1.459 | -0.697 |
| AJ | 0.16 | -0.452 |
| Bibs02 | 0.446 | 1.013 |
| Bibs02c | 0.144 | 0.062 |
| BL6 | -0.229 | -0.306 |
| BL6a | -0.222 | -0.446 |
| BXD01 | -0.035 | -0.176 |
| BXD010 | -0.29 | -0.265 |
| BXD011 | 0.189 | -0.129 |
| BXD03 | -0.234 | -0.506 |
| BXD04 | -0.503 | -0.445 |
| BXD05 | -0.882 | -1.228 |
| BXD06 | 0.058 | -1.009 |
| BXD07 | -0.457 | -0.499 |
| BXD08 | -0.085 | 0.218 |
| BXD09 | -0.382 | -0.734 |
| CAST | -0.235 | -0.352 |
| CCcont | -0.081 | -1.258 |
| DS01 | 0.0 | -0.024 |
| DS02 | -1.5 | -1.136 |
| DS04 | 0.474 | -1.2 |
| DS0c | 0.338 | -0.517 |
| GP01 | -0.569 | -0.507 |
| GP02 | -1.315 | -0.664 |
| GP0c | -2.164 | -1.526 |
| NOD | -0.252 | 0.464 |
| NZO | -1.001 | -0.328 |
| PWK | -0.466 | -0.102 |
| H37Rv_KO_CtpC | -0.618 | -1.35 |
| H37Rv_KO_CtpD | 0.951 | -0.302 |
| H37Rv_KO_Rv1272 | 0.012 | -0.448 |
| H37Rv_KO_SugABC | -2.006 | 0.318 |
| H37Rv_KO_MbtN | 0.308 | 0.368 |
| Trans05 | -0.133 | -1.554 |
| macrophage_unactivated | 0.884 | 0.518 |
| IL1 | 0.131 | 0.03 |
| Rapamycin | 1.452 | 0.531 |
| Tcell | -0.349 | 0.384 |
| GMCSF | 0.61 | 0.211 |
| IFNab | 0.302 | -0.094 |
| IFNg | -1.243 | 0.134 |
| IFNg_GMCSF1 | 0.138 | 1.351 |
| Rv1432_day32 | -0.314 | 0.0 |
| Rv1565c_day32 | -1.118 | 1.829 |
| secA2_input | -0.755 | 0.828 |
| delta_Rv3594 | -1.38 | -1.215 |
| delta_Rv3717 | -0.276 | -0.871 |
| delta_Rv3811 | -0.607 | -0.803 |
| delta_Rv0954 | -2.101 | -1.225 |
| PonA1 | -0.366 | -1.35 |
| EccD1_KO | 1.983 | 1.184 |
| EspI_KO | -0.051 | 0.465 |
| PE35_KO | 1.248 | 2.345 |
| PPE68_KO | 1.197 | 2.572 |
| glycerol2 | -1.087 | -1.621 |
| lignocerate | -0.459 | -0.533 |
| oleate | -0.25 | -0.647 |
| phosphatidylcholine | -0.528 | -0.563 |
| acetate | -0.889 | 0.066 |
| glucAc | 0.09 | -0.654 |
| Rv0950ko | 0.359 | -0.482 |
| Rv1096ko | -0.084 | -0.329 |
| Rv3684ko | -1.916 | 0.403 |
| delta_otsA_trehalose | -1.049 | -0.257 |