Top 10 genes with highest correlation to Rv1587c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0094c/- | (cc=0.6032) | info on Rv0094c/- |
| Rv3467/- | (cc=0.5797) | info on Rv3467/- |
| Rv3186/- | (cc=0.5318) | info on Rv3186/- |
| Rv0578c/PE_PGRS7 | (cc=0.5028) | info on Rv0578c/PE_PGRS7 |
| Rv1763/- | (cc=0.4954) | info on Rv1763/- |
| Rv0402c/mmpL1 | (cc=0.4907) | info on Rv0402c/mmpL1 |
| Rv2585c/- | (cc=0.4886) | info on Rv2585c/- |
| Rv1586c/- | (cc=0.4869) | info on Rv1586c/- |
| Rv3367/PE_PGRS51 | (cc=0.4764) | info on Rv3367/PE_PGRS51 |
| Rv3325/- | (cc=0.4756) | info on Rv3325/- |
Correlation of Rv1587c/- with Rv3367/PE_PGRS51
Normalized LFCs for Rv1587c/-:
(description and provenance of datasets)
| Rv1587c/- | Rv3367/PE_PGRS51 | |
| Fe_supp_jason_reseq | -0.292 | 0.23 |
| low_pH_jason_reseq | -0.253 | -1.004 |
| NO_jason_reseq | 0.26 | -0.425 |
| B6_jason_reseq | 0.172 | 0.431 |
| MHCII_jason_reseq | 0.352 | 0.767 |
| Isoniazid02 | 0.201 | -0.198 |
| Rifampicin4 | 0.0 | -0.043 |
| Ethambutol3 | 0.485 | 1.115 |
| Meropenem3 | 1.945 | 1.859 |
| Vancomycin16 | -0.069 | -0.088 |
| Rv2680_day32 | -0.18 | 0.055 |
| H37Rv_KO_MarP | -0.135 | 0.192 |
| hypoxia_3wks | 0.044 | -0.359 |
| hypoxia_6wks | -0.583 | 0.263 |
| glycerol | -1.005 | 0.802 |
| cholesterol | -0.17 | 0.504 |
| AJ | 0.607 | 0.513 |
| Bibs02 | 0.264 | 0.481 |
| Bibs02c | -0.106 | 0.55 |
| BL6 | 0.71 | -0.639 |
| BL6a | 0.198 | -0.22 |
| BXD01 | -0.162 | -0.524 |
| BXD010 | 0.572 | -0.809 |
| BXD011 | 0.759 | -0.98 |
| BXD03 | -0.009 | -0.671 |
| BXD04 | 0.415 | -0.497 |
| BXD05 | 0.286 | -0.524 |
| BXD06 | 0.133 | -0.76 |
| BXD07 | 0.138 | -0.853 |
| BXD08 | 0.36 | -0.569 |
| BXD09 | -0.017 | -0.78 |
| CAST | 0.332 | 0.409 |
| CCcont | -0.521 | -0.679 |
| DS01 | 0.25 | 0.419 |
| DS02 | 0.651 | 0.616 |
| DS04 | 0.616 | 0.195 |
| DS0c | 0.786 | -0.178 |
| GP01 | 0.51 | 0.41 |
| GP02 | 0.794 | 0.546 |
| GP0c | 0.229 | 0.191 |
| NOD | -0.143 | -0.184 |
| NZO | 0.808 | 1.272 |
| PWK | 0.71 | 0.288 |
| H37Rv_KO_CtpC | -0.459 | -0.044 |
| H37Rv_KO_CtpD | 0.287 | 0.157 |
| H37Rv_KO_Rv1272 | -0.803 | 0.291 |
| H37Rv_KO_SugABC | -1.055 | -0.072 |
| H37Rv_KO_MbtN | -0.444 | 0.833 |
| Trans05 | -0.075 | 0.326 |
| macrophage_unactivated | -0.533 | -1.095 |
| IL1 | -0.347 | -0.976 |
| Rapamycin | -0.485 | -0.5 |
| Tcell | -0.906 | -1.307 |
| GMCSF | -0.446 | -1.011 |
| IFNab | -1.125 | -1.103 |
| IFNg | 0.195 | -1.328 |
| IFNg_GMCSF1 | -0.305 | -0.462 |
| Rv1432_day32 | 2.374 | 2.471 |
| Rv1565c_day32 | 0.022 | 0.4 |
| secA2_input | -0.596 | 0.398 |
| delta_Rv3594 | 0.658 | 0.321 |
| delta_Rv3717 | -0.115 | -0.126 |
| delta_Rv3811 | 0.573 | -0.385 |
| delta_Rv0954 | 0.937 | -0.057 |
| PonA1 | 0.099 | 0.357 |
| EccD1_KO | 0.141 | 0.273 |
| EspI_KO | -0.573 | -0.123 |
| PE35_KO | -0.265 | -0.496 |
| PPE68_KO | -0.07 | -0.659 |
| glycerol2 | -0.687 | -0.552 |
| lignocerate | -0.505 | -0.058 |
| oleate | -0.43 | -0.186 |
| phosphatidylcholine | -0.562 | 0.209 |
| acetate | -0.073 | -0.655 |
| glucAc | -0.167 | -0.266 |
| Rv0950ko | 0.615 | 0.0 |
| Rv1096ko | 0.615 | 0.202 |
| Rv3684ko | 0.704 | 0.658 |
| delta_otsA_trehalose | -0.018 | 0.306 |