Top 10 genes with highest correlation to Rv1587c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0094c/- | (cc=0.6032) | info on Rv0094c/- |
| Rv3467/- | (cc=0.5797) | info on Rv3467/- |
| Rv3186/- | (cc=0.5318) | info on Rv3186/- |
| Rv0578c/PE_PGRS7 | (cc=0.5028) | info on Rv0578c/PE_PGRS7 |
| Rv1763/- | (cc=0.4954) | info on Rv1763/- |
| Rv0402c/mmpL1 | (cc=0.4907) | info on Rv0402c/mmpL1 |
| Rv2585c/- | (cc=0.4886) | info on Rv2585c/- |
| Rv1586c/- | (cc=0.4869) | info on Rv1586c/- |
| Rv3367/PE_PGRS51 | (cc=0.4764) | info on Rv3367/PE_PGRS51 |
| Rv3325/- | (cc=0.4756) | info on Rv3325/- |
Correlation of Rv1587c/- with Rv0578c/PE_PGRS7
Normalized LFCs for Rv1587c/-:
(description and provenance of datasets)
| Rv1587c/- | Rv0578c/PE_PGRS7 | |
| Fe_supp_jason_reseq | -0.292 | -2.133 |
| low_pH_jason_reseq | -0.253 | -0.806 |
| NO_jason_reseq | 0.26 | -0.99 |
| B6_jason_reseq | 0.172 | -0.628 |
| MHCII_jason_reseq | 0.352 | -0.418 |
| Isoniazid02 | 0.201 | -0.735 |
| Rifampicin4 | 0.0 | 0.42 |
| Ethambutol3 | 0.485 | 1.592 |
| Meropenem3 | 1.945 | 0.944 |
| Vancomycin16 | -0.069 | -0.271 |
| Rv2680_day32 | -0.18 | 0.172 |
| H37Rv_KO_MarP | -0.135 | 0.574 |
| hypoxia_3wks | 0.044 | -0.231 |
| hypoxia_6wks | -0.583 | -0.808 |
| glycerol | -1.005 | 0.238 |
| cholesterol | -0.17 | 0.276 |
| AJ | 0.607 | 0.983 |
| Bibs02 | 0.264 | 0.588 |
| Bibs02c | -0.106 | 0.828 |
| BL6 | 0.71 | -1.265 |
| BL6a | 0.198 | -0.739 |
| BXD01 | -0.162 | -0.89 |
| BXD010 | 0.572 | -0.64 |
| BXD011 | 0.759 | -0.87 |
| BXD03 | -0.009 | -0.464 |
| BXD04 | 0.415 | -0.796 |
| BXD05 | 0.286 | -0.386 |
| BXD06 | 0.133 | -1.211 |
| BXD07 | 0.138 | -0.788 |
| BXD08 | 0.36 | 0.107 |
| BXD09 | -0.017 | -0.702 |
| CAST | 0.332 | 0.095 |
| CCcont | -0.521 | -1.146 |
| DS01 | 0.25 | -0.101 |
| DS02 | 0.651 | 0.175 |
| DS04 | 0.616 | 0.624 |
| DS0c | 0.786 | -0.14 |
| GP01 | 0.51 | -0.31 |
| GP02 | 0.794 | -0.054 |
| GP0c | 0.229 | -0.113 |
| NOD | -0.143 | -0.583 |
| NZO | 0.808 | 0.0 |
| PWK | 0.71 | 0.269 |
| H37Rv_KO_CtpC | -0.459 | -0.511 |
| H37Rv_KO_CtpD | 0.287 | 0.606 |
| H37Rv_KO_Rv1272 | -0.803 | 0.141 |
| H37Rv_KO_SugABC | -1.055 | -0.37 |
| H37Rv_KO_MbtN | -0.444 | -0.481 |
| Trans05 | -0.075 | -0.056 |
| macrophage_unactivated | -0.533 | -1.891 |
| IL1 | -0.347 | -2.186 |
| Rapamycin | -0.485 | -2.569 |
| Tcell | -0.906 | -2.098 |
| GMCSF | -0.446 | -1.251 |
| IFNab | -1.125 | -2.851 |
| IFNg | 0.195 | -2.376 |
| IFNg_GMCSF1 | -0.305 | -1.882 |
| Rv1432_day32 | 2.374 | 1.064 |
| Rv1565c_day32 | 0.022 | -0.182 |
| secA2_input | -0.596 | 0.814 |
| delta_Rv3594 | 0.658 | 0.142 |
| delta_Rv3717 | -0.115 | -0.232 |
| delta_Rv3811 | 0.573 | -0.375 |
| delta_Rv0954 | 0.937 | -0.544 |
| PonA1 | 0.099 | -0.091 |
| EccD1_KO | 0.141 | -0.237 |
| EspI_KO | -0.573 | -0.536 |
| PE35_KO | -0.265 | -0.607 |
| PPE68_KO | -0.07 | -0.602 |
| glycerol2 | -0.687 | -1.852 |
| lignocerate | -0.505 | -2.21 |
| oleate | -0.43 | -1.528 |
| phosphatidylcholine | -0.562 | -1.852 |
| acetate | -0.073 | -2.135 |
| glucAc | -0.167 | -1.532 |
| Rv0950ko | 0.615 | -0.133 |
| Rv1096ko | 0.615 | 0.718 |
| Rv3684ko | 0.704 | 0.534 |
| delta_otsA_trehalose | -0.018 | -0.341 |