Top 10 genes with highest correlation to Rv1567c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2724c/fadE20 | (cc=0.5234) | info on Rv2724c/fadE20 |
| Rv1500/- | (cc=0.494) | info on Rv1500/- |
| Rv2355/- | (cc=0.4863) | info on Rv2355/- |
| Rv0796/- | (cc=0.4834) | info on Rv0796/- |
| Rv2735c/- | (cc=0.4828) | info on Rv2735c/- |
| Rv1724c/- | (cc=0.4776) | info on Rv1724c/- |
| Rv0989c/grcC2 | (cc=0.4772) | info on Rv0989c/grcC2 |
| Rv3854c/ethA | (cc=0.4762) | info on Rv3854c/ethA |
| Rv3796/- | (cc=0.4757) | info on Rv3796/- |
| Rv0924c/mntH | (cc=0.4742) | info on Rv0924c/mntH |
Correlation of Rv1567c/- with Rv0989c/grcC2
Normalized LFCs for Rv1567c/-:
(description and provenance of datasets)
| Rv1567c/- | Rv0989c/grcC2 | |
| Fe_supp_jason_reseq | 0.767 | 2.609 |
| low_pH_jason_reseq | -0.627 | 2.831 |
| NO_jason_reseq | 0.57 | -0.286 |
| B6_jason_reseq | 1.235 | 2.136 |
| MHCII_jason_reseq | 1.475 | 1.703 |
| Isoniazid02 | 0.17 | 0.802 |
| Rifampicin4 | 0.008 | 0.217 |
| Ethambutol3 | 0.027 | 0.289 |
| Meropenem3 | -0.162 | 0.65 |
| Vancomycin16 | -1.098 | 0.032 |
| Rv2680_day32 | 0.08 | 3.948 |
| H37Rv_KO_MarP | -1.002 | -1.853 |
| hypoxia_3wks | 0.0 | -1.519 |
| hypoxia_6wks | 0.516 | 0.451 |
| glycerol | -0.922 | 5.6 |
| cholesterol | 0.833 | 4.139 |
| AJ | 0.397 | 1.239 |
| Bibs02 | 1.429 | 4.78 |
| Bibs02c | 1.132 | 5.162 |
| BL6 | 0.8 | 4.615 |
| BL6a | 1.179 | 5.857 |
| BXD01 | 0.751 | 4.648 |
| BXD010 | 0.698 | 4.045 |
| BXD011 | 0.41 | 4.413 |
| BXD03 | 0.526 | 3.722 |
| BXD04 | 0.66 | 3.589 |
| BXD05 | 1.028 | 4.055 |
| BXD06 | 0.772 | 4.247 |
| BXD07 | 0.823 | 4.611 |
| BXD08 | 0.557 | 4.346 |
| BXD09 | 0.901 | 4.485 |
| CAST | 0.484 | 0.569 |
| CCcont | 0.438 | 4.359 |
| DS01 | 0.932 | 6.0 |
| DS02 | 0.993 | 6.0 |
| DS04 | 0.004 | 5.63 |
| DS0c | 0.919 | 5.646 |
| GP01 | 0.938 | 3.678 |
| GP02 | 1.096 | 3.906 |
| GP0c | 0.623 | 4.303 |
| NOD | 1.23 | -0.163 |
| NZO | 0.184 | 0.892 |
| PWK | 0.698 | 0.689 |
| H37Rv_KO_CtpC | 0.358 | 2.924 |
| H37Rv_KO_CtpD | 1.02 | 4.282 |
| H37Rv_KO_Rv1272 | 0.468 | 4.43 |
| H37Rv_KO_SugABC | 0.84 | 3.675 |
| H37Rv_KO_MbtN | 0.264 | 4.397 |
| Trans05 | 0.562 | 4.538 |
| macrophage_unactivated | 0.395 | 0.96 |
| IL1 | -0.199 | 0.629 |
| Rapamycin | -0.123 | -0.261 |
| Tcell | -0.248 | -0.704 |
| GMCSF | -0.338 | 0.652 |
| IFNab | 0.354 | 1.802 |
| IFNg | 0.091 | 0.179 |
| IFNg_GMCSF1 | 0.955 | -0.408 |
| Rv1432_day32 | -0.413 | 1.675 |
| Rv1565c_day32 | 0.531 | 4.63 |
| secA2_input | -0.661 | -0.294 |
| delta_Rv3594 | 0.439 | -0.381 |
| delta_Rv3717 | 0.857 | 0.414 |
| delta_Rv3811 | 0.225 | -0.211 |
| delta_Rv0954 | 1.813 | 0.074 |
| PonA1 | 0.395 | -0.892 |
| EccD1_KO | -0.559 | 0.069 |
| EspI_KO | -0.987 | 0.456 |
| PE35_KO | -0.263 | -0.642 |
| PPE68_KO | -0.717 | -0.352 |
| glycerol2 | -0.09 | -3.409 |
| lignocerate | 0.356 | -2.795 |
| oleate | -0.679 | -3.254 |
| phosphatidylcholine | -0.211 | -3.214 |
| acetate | -0.121 | 1.935 |
| glucAc | -0.334 | 0.795 |
| Rv0950ko | 0.528 | -0.585 |
| Rv1096ko | -0.477 | 0.136 |
| Rv3684ko | 0.075 | 0.124 |
| delta_otsA_trehalose | -0.301 | -1.113 |