Top 10 genes with highest correlation to Rv1527c/pks5:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1838c/vapC13 | (cc=0.5927) | info on Rv1838c/vapC13 |
| Rv2123/PPE37 | (cc=0.534) | info on Rv2123/PPE37 |
| Rv0278c/PE_PGRS3 | (cc=0.5279) | info on Rv0278c/PE_PGRS3 |
| Rv0969/ctpV | (cc=0.5033) | info on Rv0969/ctpV |
| Rv1834/lipZ | (cc=0.5007) | info on Rv1834/lipZ |
| Rv1760/- | (cc=0.4985) | info on Rv1760/- |
| Rv2177c/- | (cc=0.4975) | info on Rv2177c/- |
| Rv1625c/cya | (cc=0.4968) | info on Rv1625c/cya |
| Rv1263/amiB2 | (cc=0.4927) | info on Rv1263/amiB2 |
| Rv2025c/- | (cc=0.4908) | info on Rv2025c/- |
Correlation of Rv1527c/pks5 with Rv2025c/-
Normalized LFCs for Rv1527c/pks5:
(description and provenance of datasets)
| Rv1527c/pks5 | Rv2025c/- | |
| Fe_supp_jason_reseq | 0.175 | 0.385 |
| low_pH_jason_reseq | -0.587 | -0.905 |
| NO_jason_reseq | -0.155 | -0.541 |
| B6_jason_reseq | 0.181 | 0.798 |
| MHCII_jason_reseq | 0.229 | 0.771 |
| Isoniazid02 | -0.015 | 0.111 |
| Rifampicin4 | -0.057 | 0.187 |
| Ethambutol3 | 0.225 | 0.124 |
| Meropenem3 | 0.915 | 1.12 |
| Vancomycin16 | -0.056 | -0.133 |
| Rv2680_day32 | -0.199 | -0.651 |
| H37Rv_KO_MarP | 0.189 | -0.782 |
| hypoxia_3wks | 0.159 | -0.395 |
| hypoxia_6wks | 0.294 | -0.668 |
| glycerol | 0.196 | -2.171 |
| cholesterol | 0.013 | -1.698 |
| AJ | 0.622 | 0.583 |
| Bibs02 | 0.15 | -0.309 |
| Bibs02c | 0.477 | 0.286 |
| BL6 | 0.251 | -0.798 |
| BL6a | 0.066 | -0.301 |
| BXD01 | -0.215 | -0.641 |
| BXD010 | 0.021 | -0.67 |
| BXD011 | -0.262 | -0.824 |
| BXD03 | -0.108 | -0.51 |
| BXD04 | -0.508 | -0.409 |
| BXD05 | 0.022 | -0.882 |
| BXD06 | -0.39 | -1.093 |
| BXD07 | -0.036 | -1.332 |
| BXD08 | 0.022 | -0.726 |
| BXD09 | -0.304 | -0.78 |
| CAST | -0.12 | 0.022 |
| CCcont | 0.025 | -0.658 |
| DS01 | 0.554 | 0.645 |
| DS02 | 0.126 | 0.555 |
| DS04 | 0.455 | -0.52 |
| DS0c | 0.325 | -0.295 |
| GP01 | 1.712 | 1.838 |
| GP02 | 0.477 | 1.966 |
| GP0c | 0.555 | 0.729 |
| NOD | 0.304 | 0.605 |
| NZO | 0.314 | 0.652 |
| PWK | -0.017 | 0.706 |
| H37Rv_KO_CtpC | 0.314 | -0.887 |
| H37Rv_KO_CtpD | 0.143 | 0.082 |
| H37Rv_KO_Rv1272 | 0.415 | -0.888 |
| H37Rv_KO_SugABC | 0.611 | -1.35 |
| H37Rv_KO_MbtN | -0.13 | 0.691 |
| Trans05 | 0.289 | -0.057 |
| macrophage_unactivated | -0.158 | -0.584 |
| IL1 | -0.074 | -1.299 |
| Rapamycin | -0.114 | -0.703 |
| Tcell | -0.081 | -0.893 |
| GMCSF | 0.19 | -0.378 |
| IFNab | -0.151 | -0.26 |
| IFNg | -0.134 | -0.404 |
| IFNg_GMCSF1 | 0.189 | -0.17 |
| Rv1432_day32 | 0.216 | -0.299 |
| Rv1565c_day32 | -0.104 | -0.316 |
| secA2_input | 0.523 | -0.664 |
| delta_Rv3594 | 0.021 | -0.71 |
| delta_Rv3717 | -0.374 | -0.54 |
| delta_Rv3811 | 0.312 | -0.15 |
| delta_Rv0954 | -0.172 | -0.733 |
| PonA1 | 0.492 | -0.881 |
| EccD1_KO | 0.089 | -0.993 |
| EspI_KO | 0.262 | -0.285 |
| PE35_KO | 0.23 | 0.137 |
| PPE68_KO | 0.378 | 0.128 |
| glycerol2 | 0.46 | 0.772 |
| lignocerate | 0.673 | 0.276 |
| oleate | 0.373 | 0.696 |
| phosphatidylcholine | 0.696 | 0.427 |
| acetate | 0.845 | -0.482 |
| glucAc | 0.441 | -0.447 |
| Rv0950ko | 0.422 | 0.41 |
| Rv1096ko | 0.311 | -0.175 |
| Rv3684ko | 0.498 | 1.081 |
| delta_otsA_trehalose | 0.551 | -0.25 |