Top 10 genes with highest correlation to Rv1441c/PE_PGRS26:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0084/hycD | (cc=0.4991) | info on Rv0084/hycD |
| Rv1070c/echA8 | (cc=0.4633) | info on Rv1070c/echA8 |
| Rv3284/- | (cc=0.4242) | info on Rv3284/- |
| Rv2394/ggtB | (cc=0.4192) | info on Rv2394/ggtB |
| Rv0745/- | (cc=0.4188) | info on Rv0745/- |
| Rv2424c/- | (cc=0.4173) | info on Rv2424c/- |
| Rv1718/- | (cc=0.4156) | info on Rv1718/- |
| Rv0348/- | (cc=0.4072) | info on Rv0348/- |
| Rv2786c/ribF | (cc=0.4045) | info on Rv2786c/ribF |
| Rv3407/vapB47 | (cc=0.4029) | info on Rv3407/vapB47 |
Correlation of Rv1441c/PE_PGRS26 with Rv0745/-
Normalized LFCs for Rv1441c/PE_PGRS26:
(description and provenance of datasets)
| Rv1441c/PE_PGRS26 | Rv0745/- | |
| Fe_supp_jason_reseq | -0.281 | 0.166 |
| low_pH_jason_reseq | -0.326 | 0.984 |
| NO_jason_reseq | -0.039 | -0.646 |
| B6_jason_reseq | -0.235 | 0.042 |
| MHCII_jason_reseq | -1.827 | -0.519 |
| Isoniazid02 | 1.379 | 0.874 |
| Rifampicin4 | 0.471 | 1.516 |
| Ethambutol3 | 1.113 | 0.741 |
| Meropenem3 | 0.273 | 0.877 |
| Vancomycin16 | 0.743 | 1.236 |
| Rv2680_day32 | -0.2 | 0.464 |
| H37Rv_KO_MarP | 0.058 | -1.01 |
| hypoxia_3wks | -0.439 | -0.303 |
| hypoxia_6wks | -0.478 | -0.18 |
| glycerol | 0.825 | -0.376 |
| cholesterol | 1.273 | 0.341 |
| AJ | 0.534 | 0.694 |
| Bibs02 | 0.803 | 0.93 |
| Bibs02c | 0.268 | -2.414 |
| BL6 | -0.37 | -0.138 |
| BL6a | 0.116 | -0.739 |
| BXD01 | 0.113 | -0.465 |
| BXD010 | -0.987 | -0.197 |
| BXD011 | -0.352 | -0.657 |
| BXD03 | 0.722 | 0.201 |
| BXD04 | 0.073 | -0.385 |
| BXD05 | -0.319 | -0.731 |
| BXD06 | -0.267 | -0.664 |
| BXD07 | 0.594 | -0.323 |
| BXD08 | -0.393 | -0.616 |
| BXD09 | 0.142 | -0.112 |
| CAST | 0.232 | 0.542 |
| CCcont | -0.142 | 0.236 |
| DS01 | -0.147 | 1.009 |
| DS02 | 0.911 | 0.799 |
| DS04 | -0.153 | 2.06 |
| DS0c | 1.138 | 1.02 |
| GP01 | 0.099 | 0.811 |
| GP02 | 0.037 | 0.207 |
| GP0c | -0.333 | -0.008 |
| NOD | 0.288 | -0.586 |
| NZO | -0.257 | -0.147 |
| PWK | -0.392 | -0.044 |
| H37Rv_KO_CtpC | 0.432 | -1.6 |
| H37Rv_KO_CtpD | -0.657 | 0.282 |
| H37Rv_KO_Rv1272 | 0.486 | 1.101 |
| H37Rv_KO_SugABC | -0.443 | -0.067 |
| H37Rv_KO_MbtN | -0.828 | 0.89 |
| Trans05 | 0.721 | 0.968 |
| macrophage_unactivated | -0.593 | -1.382 |
| IL1 | 0.139 | -0.222 |
| Rapamycin | 0.509 | 0.166 |
| Tcell | -1.049 | -0.942 |
| GMCSF | -0.042 | -0.444 |
| IFNab | -0.568 | -0.762 |
| IFNg | -0.219 | -0.323 |
| IFNg_GMCSF1 | -0.421 | 0.591 |
| Rv1432_day32 | -0.012 | -0.33 |
| Rv1565c_day32 | -0.599 | 0.415 |
| secA2_input | -1.154 | 0.988 |
| delta_Rv3594 | -0.818 | -0.635 |
| delta_Rv3717 | 0.048 | 0.95 |
| delta_Rv3811 | -0.662 | 0.129 |
| delta_Rv0954 | -0.344 | 1.357 |
| PonA1 | -0.139 | 0.063 |
| EccD1_KO | 0.766 | 1.602 |
| EspI_KO | 1.155 | 0.499 |
| PE35_KO | 1.138 | 1.339 |
| PPE68_KO | 1.526 | 2.105 |
| glycerol2 | 0.233 | 1.37 |
| lignocerate | 0.669 | 1.885 |
| oleate | 0.405 | -0.162 |
| phosphatidylcholine | 0.665 | 1.307 |
| acetate | 1.214 | 2.063 |
| glucAc | 0.438 | 1.719 |
| Rv0950ko | -0.591 | -1.001 |
| Rv1096ko | -0.507 | 0.347 |
| Rv3684ko | -0.508 | 0.861 |
| delta_otsA_trehalose | 0.787 | 0.435 |