Top 10 genes with highest correlation to Rv1441c/PE_PGRS26:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0084/hycD | (cc=0.4991) | info on Rv0084/hycD |
| Rv1070c/echA8 | (cc=0.4633) | info on Rv1070c/echA8 |
| Rv3284/- | (cc=0.4242) | info on Rv3284/- |
| Rv2394/ggtB | (cc=0.4192) | info on Rv2394/ggtB |
| Rv0745/- | (cc=0.4188) | info on Rv0745/- |
| Rv2424c/- | (cc=0.4173) | info on Rv2424c/- |
| Rv1718/- | (cc=0.4156) | info on Rv1718/- |
| Rv0348/- | (cc=0.4072) | info on Rv0348/- |
| Rv2786c/ribF | (cc=0.4045) | info on Rv2786c/ribF |
| Rv3407/vapB47 | (cc=0.4029) | info on Rv3407/vapB47 |
Correlation of Rv1441c/PE_PGRS26 with Rv0084/hycD
Normalized LFCs for Rv1441c/PE_PGRS26:
(description and provenance of datasets)
| Rv1441c/PE_PGRS26 | Rv0084/hycD | |
| Fe_supp_jason_reseq | -0.281 | -1.171 |
| low_pH_jason_reseq | -0.326 | 0.432 |
| NO_jason_reseq | -0.039 | -1.024 |
| B6_jason_reseq | -0.235 | -0.769 |
| MHCII_jason_reseq | -1.827 | -1.214 |
| Isoniazid02 | 1.379 | 0.058 |
| Rifampicin4 | 0.471 | 0.601 |
| Ethambutol3 | 1.113 | -0.05 |
| Meropenem3 | 0.273 | -0.435 |
| Vancomycin16 | 0.743 | 0.544 |
| Rv2680_day32 | -0.2 | -1.581 |
| H37Rv_KO_MarP | 0.058 | 0.356 |
| hypoxia_3wks | -0.439 | -0.77 |
| hypoxia_6wks | -0.478 | -0.804 |
| glycerol | 0.825 | 1.167 |
| cholesterol | 1.273 | 0.132 |
| AJ | 0.534 | 0.054 |
| Bibs02 | 0.803 | -1.005 |
| Bibs02c | 0.268 | 0.767 |
| BL6 | -0.37 | -0.045 |
| BL6a | 0.116 | -0.595 |
| BXD01 | 0.113 | -1.074 |
| BXD010 | -0.987 | -0.469 |
| BXD011 | -0.352 | -0.305 |
| BXD03 | 0.722 | -0.344 |
| BXD04 | 0.073 | -0.632 |
| BXD05 | -0.319 | -0.342 |
| BXD06 | -0.267 | -0.133 |
| BXD07 | 0.594 | 0.228 |
| BXD08 | -0.393 | -0.814 |
| BXD09 | 0.142 | -0.491 |
| CAST | 0.232 | -1.176 |
| CCcont | -0.142 | 0.087 |
| DS01 | -0.147 | -0.115 |
| DS02 | 0.911 | -0.274 |
| DS04 | -0.153 | 0.415 |
| DS0c | 1.138 | -0.245 |
| GP01 | 0.099 | -2.056 |
| GP02 | 0.037 | -1.663 |
| GP0c | -0.333 | -1.292 |
| NOD | 0.288 | -1.575 |
| NZO | -0.257 | 0.202 |
| PWK | -0.392 | 0.8 |
| H37Rv_KO_CtpC | 0.432 | -0.413 |
| H37Rv_KO_CtpD | -0.657 | -1.516 |
| H37Rv_KO_Rv1272 | 0.486 | 0.049 |
| H37Rv_KO_SugABC | -0.443 | -1.262 |
| H37Rv_KO_MbtN | -0.828 | -1.771 |
| Trans05 | 0.721 | -1.614 |
| macrophage_unactivated | -0.593 | -1.076 |
| IL1 | 0.139 | -0.392 |
| Rapamycin | 0.509 | 0.942 |
| Tcell | -1.049 | -0.958 |
| GMCSF | -0.042 | 0.916 |
| IFNab | -0.568 | -0.079 |
| IFNg | -0.219 | -0.353 |
| IFNg_GMCSF1 | -0.421 | -0.641 |
| Rv1432_day32 | -0.012 | -0.353 |
| Rv1565c_day32 | -0.599 | -1.494 |
| secA2_input | -1.154 | -0.742 |
| delta_Rv3594 | -0.818 | -0.895 |
| delta_Rv3717 | 0.048 | -0.405 |
| delta_Rv3811 | -0.662 | 0.842 |
| delta_Rv0954 | -0.344 | -1.905 |
| PonA1 | -0.139 | -1.27 |
| EccD1_KO | 0.766 | 1.595 |
| EspI_KO | 1.155 | 1.184 |
| PE35_KO | 1.138 | 2.917 |
| PPE68_KO | 1.526 | 3.2 |
| glycerol2 | 0.233 | 0.311 |
| lignocerate | 0.669 | 1.581 |
| oleate | 0.405 | -1.791 |
| phosphatidylcholine | 0.665 | 0.517 |
| acetate | 1.214 | 1.807 |
| glucAc | 0.438 | 1.618 |
| Rv0950ko | -0.591 | -0.88 |
| Rv1096ko | -0.507 | 0.121 |
| Rv3684ko | -0.508 | -0.203 |
| delta_otsA_trehalose | 0.787 | -0.843 |