Top 10 genes with highest correlation to Rv1440/secG:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1555/frdD | (cc=0.4916) | info on Rv1555/frdD |
| Rv3013/- | (cc=0.4229) | info on Rv3013/- |
| Rv0580c/- | (cc=0.4077) | info on Rv0580c/- |
| Rv0946c/pgi | (cc=0.3975) | info on Rv0946c/pgi |
| Rv3761c/fadE36 | (cc=0.3954) | info on Rv3761c/fadE36 |
| Rv2943/- | (cc=0.39) | info on Rv2943/- |
| Rv2651c/- | (cc=0.3553) | info on Rv2651c/- |
| Rv0078A/- | (cc=0.3546) | info on Rv0078A/- |
| Rv3073c/- | (cc=0.3532) | info on Rv3073c/- |
| Rv2264c/- | (cc=0.352) | info on Rv2264c/- |
Correlation of Rv1440/secG with Rv0946c/pgi
Normalized LFCs for Rv1440/secG:
(description and provenance of datasets)
| Rv1440/secG | Rv0946c/pgi | |
| Fe_supp_jason_reseq | 0.24 | 0.923 |
| low_pH_jason_reseq | 0.13 | 0.0 |
| NO_jason_reseq | 0.672 | 0.0 |
| B6_jason_reseq | 2.116 | 0.0 |
| MHCII_jason_reseq | -0.123 | 0.0 |
| Isoniazid02 | 0.0 | -0.949 |
| Rifampicin4 | 1.313 | -1.243 |
| Ethambutol3 | 2.04 | 1.927 |
| Meropenem3 | 0.662 | -1.047 |
| Vancomycin16 | 0.698 | 2.09 |
| Rv2680_day32 | -0.336 | 0.0 |
| H37Rv_KO_MarP | 0.062 | -1.724 |
| hypoxia_3wks | 0.415 | 0.0 |
| hypoxia_6wks | -1.004 | 0.0 |
| glycerol | -0.531 | 0.0 |
| cholesterol | 1.085 | 0.0 |
| AJ | 0.324 | 0.0 |
| Bibs02 | -1.482 | 0.0 |
| Bibs02c | -1.696 | 0.0 |
| BL6 | -0.383 | 0.0 |
| BL6a | -1.468 | 0.0 |
| BXD01 | 0.182 | 0.0 |
| BXD010 | 0.042 | 0.0 |
| BXD011 | -0.088 | 0.0 |
| BXD03 | 0.168 | 0.0 |
| BXD04 | -0.916 | 0.0 |
| BXD05 | -1.191 | 0.0 |
| BXD06 | -0.241 | 0.0 |
| BXD07 | -0.278 | 0.0 |
| BXD08 | -0.437 | 0.0 |
| BXD09 | -0.863 | 0.0 |
| CAST | -0.606 | 0.0 |
| CCcont | -1.157 | 1.955 |
| DS01 | -1.831 | 0.0 |
| DS02 | -0.15 | 0.0 |
| DS04 | -0.822 | 0.0 |
| DS0c | 0.834 | 0.0 |
| GP01 | -1.801 | 0.0 |
| GP02 | 0.04 | 0.0 |
| GP0c | -0.235 | 0.0 |
| NOD | 0.314 | 0.0 |
| NZO | 0.249 | 0.0 |
| PWK | -0.516 | 0.0 |
| H37Rv_KO_CtpC | -0.231 | 0.162 |
| H37Rv_KO_CtpD | 0.177 | 0.0 |
| H37Rv_KO_Rv1272 | -0.953 | 0.0 |
| H37Rv_KO_SugABC | -1.807 | 0.0 |
| H37Rv_KO_MbtN | -1.546 | 0.196 |
| Trans05 | -2.383 | 0.0 |
| macrophage_unactivated | -0.631 | 0.0 |
| IL1 | 0.451 | 0.0 |
| Rapamycin | 0.08 | 0.0 |
| Tcell | 0.0 | 0.0 |
| GMCSF | 1.201 | 0.0 |
| IFNab | -0.082 | 0.0 |
| IFNg | -0.703 | 0.0 |
| IFNg_GMCSF1 | -0.085 | 0.0 |
| Rv1432_day32 | 1.207 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | 1.565 | 2.6 |
| delta_Rv3594 | 0.757 | 1.19 |
| delta_Rv3717 | -1.178 | 0.084 |
| delta_Rv3811 | 0.479 | 0.836 |
| delta_Rv0954 | -2.421 | -1.206 |
| PonA1 | -0.638 | -0.799 |
| EccD1_KO | -2.335 | -1.723 |
| EspI_KO | -2.63 | -1.243 |
| PE35_KO | 1.858 | 2.634 |
| PPE68_KO | 0.128 | 1.379 |
| glycerol2 | -1.198 | -1.401 |
| lignocerate | -1.617 | -1.218 |
| oleate | -0.102 | -1.418 |
| phosphatidylcholine | -0.87 | -1.401 |
| acetate | -0.886 | -1.662 |
| glucAc | -1.284 | 0.392 |
| Rv0950ko | 0.0 | -2.111 |
| Rv1096ko | -1.399 | -0.727 |
| Rv3684ko | -0.498 | -0.789 |
| delta_otsA_trehalose | 0.0 | 1.725 |