Top 10 genes with highest correlation to Rv1420/uvrC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1421/- | (cc=0.7484) | info on Rv1421/- |
| Rv1908c/katG | (cc=0.6662) | info on Rv1908c/katG |
| Rv0019c/fhaB | (cc=0.6586) | info on Rv0019c/fhaB |
| Rv1633/uvrB | (cc=0.657) | info on Rv1633/uvrB |
| Rv3715c/recR | (cc=0.6191) | info on Rv3715c/recR |
| Rv3311/- | (cc=0.6153) | info on Rv3311/- |
| Rv3864/espE | (cc=0.5896) | info on Rv3864/espE |
| Rv2190c/- | (cc=0.5867) | info on Rv2190c/- |
| Rv1364c/- | (cc=0.5835) | info on Rv1364c/- |
| Rv0016c/pbpA | (cc=0.576) | info on Rv0016c/pbpA |
Correlation of Rv1420/uvrC with Rv3311/-
Normalized LFCs for Rv1420/uvrC:
(description and provenance of datasets)
| Rv1420/uvrC | Rv3311/- | |
| Fe_supp_jason_reseq | 1.773 | 1.751 |
| low_pH_jason_reseq | 0.085 | 0.656 |
| NO_jason_reseq | -1.467 | 1.205 |
| B6_jason_reseq | -0.799 | 0.232 |
| MHCII_jason_reseq | -0.217 | -0.348 |
| Isoniazid02 | -0.457 | -0.348 |
| Rifampicin4 | 0.699 | 1.893 |
| Ethambutol3 | -1.07 | -2.382 |
| Meropenem3 | -0.522 | -1.335 |
| Vancomycin16 | 0.162 | 2.319 |
| Rv2680_day32 | 0.222 | 0.739 |
| H37Rv_KO_MarP | -2.503 | -4.575 |
| hypoxia_3wks | 0.949 | 2.52 |
| hypoxia_6wks | 0.867 | 2.631 |
| glycerol | 0.136 | -0.617 |
| cholesterol | 0.711 | 1.19 |
| AJ | -0.541 | -2.931 |
| Bibs02 | 1.827 | -2.129 |
| Bibs02c | 0.399 | -1.757 |
| BL6 | 0.816 | 1.045 |
| BL6a | 1.291 | -0.69 |
| BXD01 | 1.666 | 0.431 |
| BXD010 | -0.191 | -0.17 |
| BXD011 | 1.128 | 0.585 |
| BXD03 | 1.157 | 0.178 |
| BXD04 | -0.09 | 0.53 |
| BXD05 | 0.539 | 0.214 |
| BXD06 | 0.92 | -0.988 |
| BXD07 | 0.555 | 1.223 |
| BXD08 | 0.653 | 0.41 |
| BXD09 | 0.916 | 0.384 |
| CAST | -0.976 | -2.279 |
| CCcont | 2.214 | 1.183 |
| DS01 | -0.171 | -2.154 |
| DS02 | -0.922 | -0.956 |
| DS04 | 0.777 | 0.201 |
| DS0c | 0.652 | -1.538 |
| GP01 | -0.147 | -1.478 |
| GP02 | 0.292 | -1.096 |
| GP0c | 0.748 | 0.722 |
| NOD | -0.524 | -1.809 |
| NZO | 0.0 | -1.477 |
| PWK | -0.293 | -3.068 |
| H37Rv_KO_CtpC | 1.232 | 0.663 |
| H37Rv_KO_CtpD | 0.381 | -0.717 |
| H37Rv_KO_Rv1272 | 1.409 | 1.423 |
| H37Rv_KO_SugABC | 1.015 | 1.847 |
| H37Rv_KO_MbtN | 1.942 | 0.889 |
| Trans05 | 1.847 | 2.028 |
| macrophage_unactivated | 0.253 | -1.054 |
| IL1 | -0.658 | 0.104 |
| Rapamycin | 0.7 | -0.264 |
| Tcell | 1.769 | 0.228 |
| GMCSF | -0.224 | -0.803 |
| IFNab | 2.276 | 0.759 |
| IFNg | 0.882 | 0.855 |
| IFNg_GMCSF1 | 0.716 | -0.773 |
| Rv1432_day32 | -0.568 | 0.473 |
| Rv1565c_day32 | 0.873 | 0.655 |
| secA2_input | 0.276 | 3.295 |
| delta_Rv3594 | 1.398 | 1.326 |
| delta_Rv3717 | 1.754 | 2.168 |
| delta_Rv3811 | 1.895 | 1.799 |
| delta_Rv0954 | 0.282 | -1.942 |
| PonA1 | 0.284 | -0.549 |
| EccD1_KO | -1.582 | -1.444 |
| EspI_KO | -1.124 | -0.254 |
| PE35_KO | 0.184 | 0.289 |
| PPE68_KO | -0.586 | -0.154 |
| glycerol2 | -1.574 | -3.537 |
| lignocerate | -1.959 | -1.88 |
| oleate | -2.181 | -3.262 |
| phosphatidylcholine | -2.06 | -1.371 |
| acetate | -0.248 | -0.047 |
| glucAc | -0.238 | -0.082 |
| Rv0950ko | -1.288 | -1.357 |
| Rv1096ko | -0.057 | -0.763 |
| Rv3684ko | -0.445 | -0.829 |
| delta_otsA_trehalose | 1.089 | 0.813 |