Top 10 genes with highest correlation to Rv1420/uvrC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1421/- | (cc=0.7484) | info on Rv1421/- |
| Rv1908c/katG | (cc=0.6662) | info on Rv1908c/katG |
| Rv0019c/fhaB | (cc=0.6586) | info on Rv0019c/fhaB |
| Rv1633/uvrB | (cc=0.657) | info on Rv1633/uvrB |
| Rv3715c/recR | (cc=0.6191) | info on Rv3715c/recR |
| Rv3311/- | (cc=0.6153) | info on Rv3311/- |
| Rv3864/espE | (cc=0.5896) | info on Rv3864/espE |
| Rv2190c/- | (cc=0.5867) | info on Rv2190c/- |
| Rv1364c/- | (cc=0.5835) | info on Rv1364c/- |
| Rv0016c/pbpA | (cc=0.576) | info on Rv0016c/pbpA |
Correlation of Rv1420/uvrC with Rv1633/uvrB
Normalized LFCs for Rv1420/uvrC:
(description and provenance of datasets)
| Rv1420/uvrC | Rv1633/uvrB | |
| Fe_supp_jason_reseq | 1.773 | 2.98 |
| low_pH_jason_reseq | 0.085 | 0.507 |
| NO_jason_reseq | -1.467 | -0.517 |
| B6_jason_reseq | -0.799 | -1.215 |
| MHCII_jason_reseq | -0.217 | -0.73 |
| Isoniazid02 | -0.457 | -0.648 |
| Rifampicin4 | 0.699 | 0.022 |
| Ethambutol3 | -1.07 | 0.067 |
| Meropenem3 | -0.522 | -0.71 |
| Vancomycin16 | 0.162 | -1.326 |
| Rv2680_day32 | 0.222 | -0.518 |
| H37Rv_KO_MarP | -2.503 | -0.563 |
| hypoxia_3wks | 0.949 | -2.743 |
| hypoxia_6wks | 0.867 | -2.575 |
| glycerol | 0.136 | 1.565 |
| cholesterol | 0.711 | 0.932 |
| AJ | -0.541 | -0.124 |
| Bibs02 | 1.827 | 0.348 |
| Bibs02c | 0.399 | 0.958 |
| BL6 | 0.816 | 1.479 |
| BL6a | 1.291 | 2.274 |
| BXD01 | 1.666 | 1.401 |
| BXD010 | -0.191 | 1.514 |
| BXD011 | 1.128 | 2.168 |
| BXD03 | 1.157 | 1.77 |
| BXD04 | -0.09 | 1.523 |
| BXD05 | 0.539 | 1.762 |
| BXD06 | 0.92 | 1.844 |
| BXD07 | 0.555 | 1.792 |
| BXD08 | 0.653 | 1.572 |
| BXD09 | 0.916 | 1.902 |
| CAST | -0.976 | -0.692 |
| CCcont | 2.214 | 3.594 |
| DS01 | -0.171 | 0.12 |
| DS02 | -0.922 | 0.318 |
| DS04 | 0.777 | 0.888 |
| DS0c | 0.652 | 0.596 |
| GP01 | -0.147 | 1.062 |
| GP02 | 0.292 | 0.159 |
| GP0c | 0.748 | 2.173 |
| NOD | -0.524 | -1.199 |
| NZO | 0.0 | -0.897 |
| PWK | -0.293 | -0.732 |
| H37Rv_KO_CtpC | 1.232 | 2.151 |
| H37Rv_KO_CtpD | 0.381 | 2.17 |
| H37Rv_KO_Rv1272 | 1.409 | 2.201 |
| H37Rv_KO_SugABC | 1.015 | 1.396 |
| H37Rv_KO_MbtN | 1.942 | 3.197 |
| Trans05 | 1.847 | 1.691 |
| macrophage_unactivated | 0.253 | 0.792 |
| IL1 | -0.658 | -0.469 |
| Rapamycin | 0.7 | 0.15 |
| Tcell | 1.769 | 0.746 |
| GMCSF | -0.224 | 0.0 |
| IFNab | 2.276 | 1.817 |
| IFNg | 0.882 | 0.067 |
| IFNg_GMCSF1 | 0.716 | -0.408 |
| Rv1432_day32 | -0.568 | -0.617 |
| Rv1565c_day32 | 0.873 | -0.706 |
| secA2_input | 0.276 | 1.027 |
| delta_Rv3594 | 1.398 | 0.829 |
| delta_Rv3717 | 1.754 | 0.982 |
| delta_Rv3811 | 1.895 | 0.671 |
| delta_Rv0954 | 0.282 | 0.178 |
| PonA1 | 0.284 | -0.372 |
| EccD1_KO | -1.582 | -0.595 |
| EspI_KO | -1.124 | -0.248 |
| PE35_KO | 0.184 | -0.114 |
| PPE68_KO | -0.586 | -0.026 |
| glycerol2 | -1.574 | -1.772 |
| lignocerate | -1.959 | -1.842 |
| oleate | -2.181 | -2.678 |
| phosphatidylcholine | -2.06 | -2.389 |
| acetate | -0.248 | -0.09 |
| glucAc | -0.238 | 0.511 |
| Rv0950ko | -1.288 | -0.383 |
| Rv1096ko | -0.057 | -0.208 |
| Rv3684ko | -0.445 | -0.295 |
| delta_otsA_trehalose | 1.089 | 0.476 |