Top 10 genes with highest correlation to Rv1400c/lipI:
update plot | correlation | link to info on gene |
---|---|---|
Rv3702c/- | (cc=0.49) | info on Rv3702c/- |
Rv3016/lpqA | (cc=0.4824) | info on Rv3016/lpqA |
Rv1106c/- | (cc=0.4154) | info on Rv1106c/- |
Rv1358/- | (cc=0.4148) | info on Rv1358/- |
Rv1946c/lppG | (cc=0.4121) | info on Rv1946c/lppG |
Rv1436/gap | (cc=0.4039) | info on Rv1436/gap |
Rv2537c/aroD | (cc=0.4031) | info on Rv2537c/aroD |
Rv1875/- | (cc=0.4003) | info on Rv1875/- |
Rv2734/- | (cc=0.3977) | info on Rv2734/- |
Rv1424c/- | (cc=0.3948) | info on Rv1424c/- |
Correlation of Rv1400c/lipI with Rv3016/lpqA
Normalized LFCs for Rv1400c/lipI:
(description and provenance of datasets)
Rv1400c/lipI | Rv3016/lpqA | |
Fe_supp_jason_reseq | 0.276 | -1.077 |
low_pH_jason_reseq | 0.427 | -0.43 |
NO_jason_reseq | 0.772 | -0.068 |
B6_jason_reseq | 0.326 | -1.444 |
MHCII_jason_reseq | -0.932 | -1.914 |
Isoniazid02 | 0.163 | 0.087 |
Rifampicin4 | 0.588 | -0.198 |
Ethambutol3 | 0.18 | 0.277 |
Meropenem3 | 0.892 | 2.468 |
Vancomycin16 | 0.393 | -0.287 |
Rv2680_day32 | -1.139 | -0.452 |
H37Rv_KO_MarP | -1.204 | -0.078 |
hypoxia_3wks | -0.132 | 0.128 |
hypoxia_6wks | 0.779 | -0.069 |
glycerol | -0.363 | -0.895 |
cholesterol | -0.898 | -1.184 |
AJ | -1.114 | -0.361 |
Bibs02 | -0.212 | -1.131 |
Bibs02c | 0.218 | 0.614 |
BL6 | 0.53 | 1.181 |
BL6a | 0.35 | 0.974 |
BXD01 | 0.73 | 0.239 |
BXD010 | -0.072 | 0.142 |
BXD011 | 0.869 | 0.567 |
BXD03 | -0.076 | 1.236 |
BXD04 | -0.034 | 0.65 |
BXD05 | 0.0 | 0.302 |
BXD06 | 0.236 | 0.463 |
BXD07 | 0.144 | 0.681 |
BXD08 | 0.106 | 0.154 |
BXD09 | -0.208 | 0.076 |
CAST | -0.34 | 0.025 |
CCcont | -0.173 | 0.547 |
DS01 | -0.065 | -0.642 |
DS02 | -0.391 | -0.243 |
DS04 | 0.557 | -0.157 |
DS0c | -0.123 | -0.872 |
GP01 | 0.127 | 0.932 |
GP02 | -0.023 | 0.241 |
GP0c | -0.112 | -0.372 |
NOD | -0.332 | -1.113 |
NZO | -0.295 | -0.644 |
PWK | 0.521 | -0.59 |
H37Rv_KO_CtpC | -1.365 | 0.393 |
H37Rv_KO_CtpD | -0.405 | 0.523 |
H37Rv_KO_Rv1272 | 2.418 | 1.561 |
H37Rv_KO_SugABC | 1.65 | 0.987 |
H37Rv_KO_MbtN | -1.001 | -0.222 |
Trans05 | 2.361 | 0.879 |
macrophage_unactivated | 0.751 | 0.647 |
IL1 | -0.11 | 0.314 |
Rapamycin | 0.221 | 0.779 |
Tcell | 0.978 | 0.02 |
GMCSF | 0.372 | 0.475 |
IFNab | 1.339 | 0.481 |
IFNg | 1.184 | 0.297 |
IFNg_GMCSF1 | 0.336 | 0.798 |
Rv1432_day32 | 0.0 | -0.433 |
Rv1565c_day32 | -0.137 | 0.208 |
secA2_input | 0.0 | 0.38 |
delta_Rv3594 | 0.125 | 1.017 |
delta_Rv3717 | -0.148 | 0.254 |
delta_Rv3811 | -0.269 | 0.787 |
delta_Rv0954 | 0.394 | 0.373 |
PonA1 | 0.063 | -0.577 |
EccD1_KO | 0.888 | 0.714 |
EspI_KO | 0.12 | 0.311 |
PE35_KO | 1.706 | 0.907 |
PPE68_KO | 1.395 | 1.193 |
glycerol2 | -0.835 | -0.172 |
lignocerate | -0.532 | 0.045 |
oleate | -0.096 | -0.125 |
phosphatidylcholine | -0.374 | 0.095 |
acetate | -0.535 | -0.386 |
glucAc | -0.724 | 0.091 |
Rv0950ko | -0.181 | 0.44 |
Rv1096ko | 0.0 | 0.042 |
Rv3684ko | 0.282 | 0.023 |
delta_otsA_trehalose | 0.139 | 0.615 |