Top 10 genes with highest correlation to Rv1400c/lipI:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3702c/- | (cc=0.49) | info on Rv3702c/- |
| Rv3016/lpqA | (cc=0.4824) | info on Rv3016/lpqA |
| Rv1106c/- | (cc=0.4154) | info on Rv1106c/- |
| Rv1358/- | (cc=0.4148) | info on Rv1358/- |
| Rv1946c/lppG | (cc=0.4121) | info on Rv1946c/lppG |
| Rv1436/gap | (cc=0.4039) | info on Rv1436/gap |
| Rv2537c/aroD | (cc=0.4031) | info on Rv2537c/aroD |
| Rv1875/- | (cc=0.4003) | info on Rv1875/- |
| Rv2734/- | (cc=0.3977) | info on Rv2734/- |
| Rv1424c/- | (cc=0.3948) | info on Rv1424c/- |
Correlation of Rv1400c/lipI with Rv1106c/-
Normalized LFCs for Rv1400c/lipI:
(description and provenance of datasets)
| Rv1400c/lipI | Rv1106c/- | |
| Fe_supp_jason_reseq | 0.276 | -0.227 |
| low_pH_jason_reseq | 0.427 | 0.035 |
| NO_jason_reseq | 0.772 | -0.079 |
| B6_jason_reseq | 0.326 | -1.55 |
| MHCII_jason_reseq | -0.932 | -1.269 |
| Isoniazid02 | 0.163 | -0.677 |
| Rifampicin4 | 0.588 | -0.42 |
| Ethambutol3 | 0.18 | -0.714 |
| Meropenem3 | 0.892 | -0.527 |
| Vancomycin16 | 0.393 | -0.284 |
| Rv2680_day32 | -1.139 | -1.111 |
| H37Rv_KO_MarP | -1.204 | -0.217 |
| hypoxia_3wks | -0.132 | 0.183 |
| hypoxia_6wks | 0.779 | 0.248 |
| glycerol | -0.363 | -0.667 |
| cholesterol | -0.898 | -1.683 |
| AJ | -1.114 | -0.555 |
| Bibs02 | -0.212 | 0.348 |
| Bibs02c | 0.218 | -0.203 |
| BL6 | 0.53 | 0.189 |
| BL6a | 0.35 | -0.095 |
| BXD01 | 0.73 | -0.498 |
| BXD010 | -0.072 | 0.204 |
| BXD011 | 0.869 | -0.335 |
| BXD03 | -0.076 | -0.371 |
| BXD04 | -0.034 | -0.348 |
| BXD05 | 0.0 | -0.739 |
| BXD06 | 0.236 | -0.102 |
| BXD07 | 0.144 | -0.339 |
| BXD08 | 0.106 | -1.02 |
| BXD09 | -0.208 | 0.076 |
| CAST | -0.34 | -0.524 |
| CCcont | -0.173 | 0.475 |
| DS01 | -0.065 | -0.565 |
| DS02 | -0.391 | -0.325 |
| DS04 | 0.557 | -0.729 |
| DS0c | -0.123 | -0.889 |
| GP01 | 0.127 | -0.345 |
| GP02 | -0.023 | 0.444 |
| GP0c | -0.112 | -0.551 |
| NOD | -0.332 | -0.844 |
| NZO | -0.295 | -0.331 |
| PWK | 0.521 | 0.158 |
| H37Rv_KO_CtpC | -1.365 | -0.118 |
| H37Rv_KO_CtpD | -0.405 | -0.085 |
| H37Rv_KO_Rv1272 | 2.418 | 0.852 |
| H37Rv_KO_SugABC | 1.65 | 0.443 |
| H37Rv_KO_MbtN | -1.001 | 0.083 |
| Trans05 | 2.361 | 0.388 |
| macrophage_unactivated | 0.751 | 0.23 |
| IL1 | -0.11 | 0.899 |
| Rapamycin | 0.221 | 0.666 |
| Tcell | 0.978 | 0.479 |
| GMCSF | 0.372 | 0.333 |
| IFNab | 1.339 | 1.333 |
| IFNg | 1.184 | 0.46 |
| IFNg_GMCSF1 | 0.336 | 0.346 |
| Rv1432_day32 | 0.0 | -1.201 |
| Rv1565c_day32 | -0.137 | -0.842 |
| secA2_input | 0.0 | -0.365 |
| delta_Rv3594 | 0.125 | 0.191 |
| delta_Rv3717 | -0.148 | 0.388 |
| delta_Rv3811 | -0.269 | 0.25 |
| delta_Rv0954 | 0.394 | -0.461 |
| PonA1 | 0.063 | -0.141 |
| EccD1_KO | 0.888 | 0.546 |
| EspI_KO | 0.12 | 0.53 |
| PE35_KO | 1.706 | 1.073 |
| PPE68_KO | 1.395 | 0.905 |
| glycerol2 | -0.835 | 0.405 |
| lignocerate | -0.532 | 0.381 |
| oleate | -0.096 | 0.482 |
| phosphatidylcholine | -0.374 | 0.202 |
| acetate | -0.535 | -0.078 |
| glucAc | -0.724 | 0.053 |
| Rv0950ko | -0.181 | 0.302 |
| Rv1096ko | 0.0 | 0.582 |
| Rv3684ko | 0.282 | 0.793 |
| delta_otsA_trehalose | 0.139 | 0.395 |