Top 10 genes with highest correlation to Rv1400c/lipI:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3702c/- | (cc=0.49) | info on Rv3702c/- |
| Rv3016/lpqA | (cc=0.4824) | info on Rv3016/lpqA |
| Rv1106c/- | (cc=0.4154) | info on Rv1106c/- |
| Rv1358/- | (cc=0.4148) | info on Rv1358/- |
| Rv1946c/lppG | (cc=0.4121) | info on Rv1946c/lppG |
| Rv1436/gap | (cc=0.4039) | info on Rv1436/gap |
| Rv2537c/aroD | (cc=0.4031) | info on Rv2537c/aroD |
| Rv1875/- | (cc=0.4003) | info on Rv1875/- |
| Rv2734/- | (cc=0.3977) | info on Rv2734/- |
| Rv1424c/- | (cc=0.3948) | info on Rv1424c/- |
Correlation of Rv1400c/lipI with Rv3702c/-
Normalized LFCs for Rv1400c/lipI:
(description and provenance of datasets)
| Rv1400c/lipI | Rv3702c/- | |
| Fe_supp_jason_reseq | 0.276 | -0.497 |
| low_pH_jason_reseq | 0.427 | -1.087 |
| NO_jason_reseq | 0.772 | -0.391 |
| B6_jason_reseq | 0.326 | -2.777 |
| MHCII_jason_reseq | -0.932 | -3.274 |
| Isoniazid02 | 0.163 | -0.052 |
| Rifampicin4 | 0.588 | 0.615 |
| Ethambutol3 | 0.18 | -0.578 |
| Meropenem3 | 0.892 | 1.089 |
| Vancomycin16 | 0.393 | 0.183 |
| Rv2680_day32 | -1.139 | -3.716 |
| H37Rv_KO_MarP | -1.204 | -1.048 |
| hypoxia_3wks | -0.132 | 0.0 |
| hypoxia_6wks | 0.779 | 0.877 |
| glycerol | -0.363 | -0.831 |
| cholesterol | -0.898 | -0.187 |
| AJ | -1.114 | -0.57 |
| Bibs02 | -0.212 | -0.339 |
| Bibs02c | 0.218 | -2.161 |
| BL6 | 0.53 | -0.161 |
| BL6a | 0.35 | -0.255 |
| BXD01 | 0.73 | 0.062 |
| BXD010 | -0.072 | -1.601 |
| BXD011 | 0.869 | 0.227 |
| BXD03 | -0.076 | -0.291 |
| BXD04 | -0.034 | -0.342 |
| BXD05 | 0.0 | 0.469 |
| BXD06 | 0.236 | 0.032 |
| BXD07 | 0.144 | -0.473 |
| BXD08 | 0.106 | 0.0 |
| BXD09 | -0.208 | 0.162 |
| CAST | -0.34 | 0.314 |
| CCcont | -0.173 | 0.071 |
| DS01 | -0.065 | -0.972 |
| DS02 | -0.391 | -1.979 |
| DS04 | 0.557 | -0.943 |
| DS0c | -0.123 | -0.163 |
| GP01 | 0.127 | 0.969 |
| GP02 | -0.023 | -0.86 |
| GP0c | -0.112 | 1.301 |
| NOD | -0.332 | -1.007 |
| NZO | -0.295 | -0.75 |
| PWK | 0.521 | 1.491 |
| H37Rv_KO_CtpC | -1.365 | -1.386 |
| H37Rv_KO_CtpD | -0.405 | 0.963 |
| H37Rv_KO_Rv1272 | 2.418 | 1.573 |
| H37Rv_KO_SugABC | 1.65 | -1.162 |
| H37Rv_KO_MbtN | -1.001 | -1.0 |
| Trans05 | 2.361 | 1.803 |
| macrophage_unactivated | 0.751 | -1.458 |
| IL1 | -0.11 | -0.303 |
| Rapamycin | 0.221 | -1.096 |
| Tcell | 0.978 | -0.844 |
| GMCSF | 0.372 | -0.684 |
| IFNab | 1.339 | -0.184 |
| IFNg | 1.184 | 0.807 |
| IFNg_GMCSF1 | 0.336 | -0.192 |
| Rv1432_day32 | 0.0 | -1.117 |
| Rv1565c_day32 | -0.137 | -0.766 |
| secA2_input | 0.0 | -1.036 |
| delta_Rv3594 | 0.125 | -0.289 |
| delta_Rv3717 | -0.148 | -0.271 |
| delta_Rv3811 | -0.269 | 0.248 |
| delta_Rv0954 | 0.394 | 0.894 |
| PonA1 | 0.063 | -0.404 |
| EccD1_KO | 0.888 | 0.141 |
| EspI_KO | 0.12 | 1.32 |
| PE35_KO | 1.706 | 0.913 |
| PPE68_KO | 1.395 | 1.277 |
| glycerol2 | -0.835 | -1.094 |
| lignocerate | -0.532 | -0.549 |
| oleate | -0.096 | 0.798 |
| phosphatidylcholine | -0.374 | -0.223 |
| acetate | -0.535 | -0.8 |
| glucAc | -0.724 | -2.046 |
| Rv0950ko | -0.181 | 0.588 |
| Rv1096ko | 0.0 | -0.537 |
| Rv3684ko | 0.282 | 0.134 |
| delta_otsA_trehalose | 0.139 | -0.637 |