Top 10 genes with highest correlation to Rv1387/PPE20:
update plot | correlation | link to info on gene |
---|---|---|
Rv1386/PE15 | (cc=0.7952) | info on Rv1386/PE15 |
Rv0930/pstA1 | (cc=0.6805) | info on Rv0930/pstA1 |
Rv3842c/glpQ1 | (cc=0.6563) | info on Rv3842c/glpQ1 |
Rv3689/- | (cc=0.6534) | info on Rv3689/- |
Rv0928/pstS3 | (cc=0.6527) | info on Rv0928/pstS3 |
Rv0929/pstC2 | (cc=0.648) | info on Rv0929/pstC2 |
Rv1925/fadD31 | (cc=0.6392) | info on Rv1925/fadD31 |
Rv2735c/- | (cc=0.6373) | info on Rv2735c/- |
Rv0645c/mmaA1 | (cc=0.6342) | info on Rv0645c/mmaA1 |
Rv0820/phoT | (cc=0.6121) | info on Rv0820/phoT |
Correlation of Rv1387/PPE20 with Rv0929/pstC2
Normalized LFCs for Rv1387/PPE20:
(description and provenance of datasets)
Rv1387/PPE20 | Rv0929/pstC2 | |
Fe_supp_jason_reseq | -1.71 | -2.603 |
low_pH_jason_reseq | -1.061 | 3.033 |
NO_jason_reseq | -0.772 | -2.625 |
B6_jason_reseq | 0.254 | 1.639 |
MHCII_jason_reseq | -0.581 | 0.514 |
Isoniazid02 | -0.93 | -0.281 |
Rifampicin4 | 0.482 | -3.831 |
Ethambutol3 | -0.393 | 1.007 |
Meropenem3 | 0.258 | -1.942 |
Vancomycin16 | -0.57 | -1.647 |
Rv2680_day32 | 0.989 | 3.528 |
H37Rv_KO_MarP | -1.185 | -3.056 |
hypoxia_3wks | 0.028 | -4.406 |
hypoxia_6wks | 0.72 | -0.061 |
glycerol | -1.504 | 1.599 |
cholesterol | -0.696 | 3.859 |
AJ | 0.158 | 0.573 |
Bibs02 | -0.326 | 2.832 |
Bibs02c | 0.65 | 1.441 |
BL6 | 0.692 | 5.842 |
BL6a | 0.934 | 6.0 |
BXD01 | 1.192 | 6.0 |
BXD010 | 1.342 | 6.0 |
BXD011 | 1.167 | 6.0 |
BXD03 | 1.269 | 5.602 |
BXD04 | 1.003 | 6.0 |
BXD05 | 1.569 | 6.0 |
BXD06 | 1.811 | 6.0 |
BXD07 | 0.98 | 6.0 |
BXD08 | 1.125 | 6.0 |
BXD09 | 1.125 | 6.0 |
CAST | 1.825 | 2.361 |
CCcont | -0.567 | 3.417 |
DS01 | -0.587 | -0.352 |
DS02 | -0.868 | 0.285 |
DS04 | 0.267 | 3.18 |
DS0c | -0.548 | 0.762 |
GP01 | 1.008 | 4.532 |
GP02 | 2.035 | 6.0 |
GP0c | 0.736 | 6.0 |
NOD | 0.5 | 0.295 |
NZO | 0.35 | 0.38 |
PWK | 2.083 | 2.384 |
H37Rv_KO_CtpC | 2.061 | 4.283 |
H37Rv_KO_CtpD | 0.578 | 2.232 |
H37Rv_KO_Rv1272 | 1.045 | 5.607 |
H37Rv_KO_SugABC | 0.788 | 5.047 |
H37Rv_KO_MbtN | 1.039 | 6.0 |
Trans05 | 1.611 | 5.884 |
macrophage_unactivated | -0.347 | -2.509 |
IL1 | -0.825 | -2.358 |
Rapamycin | -1.323 | -3.686 |
Tcell | 0.336 | -1.922 |
GMCSF | -0.312 | -2.698 |
IFNab | -0.411 | 3.419 |
IFNg | 0.706 | -4.479 |
IFNg_GMCSF1 | 0.408 | -5.156 |
Rv1432_day32 | 1.138 | 6.0 |
Rv1565c_day32 | -0.455 | 0.415 |
secA2_input | -1.199 | -3.467 |
delta_Rv3594 | 0.575 | 1.036 |
delta_Rv3717 | 1.713 | 3.279 |
delta_Rv3811 | 0.625 | 1.152 |
delta_Rv0954 | -0.72 | -3.841 |
PonA1 | -1.868 | -2.253 |
EccD1_KO | -0.312 | -1.533 |
EspI_KO | -0.405 | -1.974 |
PE35_KO | -0.618 | -0.601 |
PPE68_KO | -0.71 | -0.765 |
glycerol2 | -0.38 | -4.614 |
lignocerate | -0.095 | -2.423 |
oleate | -0.997 | -4.669 |
phosphatidylcholine | 0.028 | -3.748 |
acetate | -0.239 | -0.83 |
glucAc | 0.007 | -1.023 |
Rv0950ko | 0.024 | -4.158 |
Rv1096ko | -0.365 | 0.344 |
Rv3684ko | 0.111 | -0.249 |
delta_otsA_trehalose | 0.083 | -1.89 |