Top 10 genes with highest correlation to Rv1387/PPE20:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1386/PE15 | (cc=0.7952) | info on Rv1386/PE15 |
| Rv0930/pstA1 | (cc=0.6805) | info on Rv0930/pstA1 |
| Rv3842c/glpQ1 | (cc=0.6563) | info on Rv3842c/glpQ1 |
| Rv3689/- | (cc=0.6534) | info on Rv3689/- |
| Rv0928/pstS3 | (cc=0.6527) | info on Rv0928/pstS3 |
| Rv0929/pstC2 | (cc=0.648) | info on Rv0929/pstC2 |
| Rv1925/fadD31 | (cc=0.6392) | info on Rv1925/fadD31 |
| Rv2735c/- | (cc=0.6373) | info on Rv2735c/- |
| Rv0645c/mmaA1 | (cc=0.6342) | info on Rv0645c/mmaA1 |
| Rv0820/phoT | (cc=0.6121) | info on Rv0820/phoT |
Correlation of Rv1387/PPE20 with Rv0928/pstS3
Normalized LFCs for Rv1387/PPE20:
(description and provenance of datasets)
| Rv1387/PPE20 | Rv0928/pstS3 | |
| Fe_supp_jason_reseq | -1.71 | -3.391 |
| low_pH_jason_reseq | -1.061 | 1.549 |
| NO_jason_reseq | -0.772 | -3.363 |
| B6_jason_reseq | 0.254 | 0.406 |
| MHCII_jason_reseq | -0.581 | 0.372 |
| Isoniazid02 | -0.93 | 0.156 |
| Rifampicin4 | 0.482 | -4.059 |
| Ethambutol3 | -0.393 | -0.989 |
| Meropenem3 | 0.258 | -2.653 |
| Vancomycin16 | -0.57 | -2.26 |
| Rv2680_day32 | 0.989 | 3.982 |
| H37Rv_KO_MarP | -1.185 | -2.74 |
| hypoxia_3wks | 0.028 | -3.413 |
| hypoxia_6wks | 0.72 | 1.128 |
| glycerol | -1.504 | 4.051 |
| cholesterol | -0.696 | 3.767 |
| AJ | 0.158 | 1.99 |
| Bibs02 | -0.326 | 1.819 |
| Bibs02c | 0.65 | 2.23 |
| BL6 | 0.692 | 5.545 |
| BL6a | 0.934 | 6.0 |
| BXD01 | 1.192 | 6.0 |
| BXD010 | 1.342 | 6.0 |
| BXD011 | 1.167 | 6.0 |
| BXD03 | 1.269 | 5.608 |
| BXD04 | 1.003 | 6.0 |
| BXD05 | 1.569 | 6.0 |
| BXD06 | 1.811 | 6.0 |
| BXD07 | 0.98 | 6.0 |
| BXD08 | 1.125 | 6.0 |
| BXD09 | 1.125 | 6.0 |
| CAST | 1.825 | 2.334 |
| CCcont | -0.567 | 3.228 |
| DS01 | -0.587 | 0.0 |
| DS02 | -0.868 | 0.101 |
| DS04 | 0.267 | 2.0 |
| DS0c | -0.548 | 1.053 |
| GP01 | 1.008 | 5.887 |
| GP02 | 2.035 | 5.592 |
| GP0c | 0.736 | 6.0 |
| NOD | 0.5 | 0.649 |
| NZO | 0.35 | 2.227 |
| PWK | 2.083 | 4.575 |
| H37Rv_KO_CtpC | 2.061 | 3.13 |
| H37Rv_KO_CtpD | 0.578 | 1.414 |
| H37Rv_KO_Rv1272 | 1.045 | 4.357 |
| H37Rv_KO_SugABC | 0.788 | 3.955 |
| H37Rv_KO_MbtN | 1.039 | 6.0 |
| Trans05 | 1.611 | 5.513 |
| macrophage_unactivated | -0.347 | -2.632 |
| IL1 | -0.825 | -3.073 |
| Rapamycin | -1.323 | -3.492 |
| Tcell | 0.336 | -2.47 |
| GMCSF | -0.312 | -3.11 |
| IFNab | -0.411 | 2.618 |
| IFNg | 0.706 | -5.161 |
| IFNg_GMCSF1 | 0.408 | -4.672 |
| Rv1432_day32 | 1.138 | 6.0 |
| Rv1565c_day32 | -0.455 | -0.314 |
| secA2_input | -1.199 | -1.969 |
| delta_Rv3594 | 0.575 | -0.055 |
| delta_Rv3717 | 1.713 | 2.024 |
| delta_Rv3811 | 0.625 | 0.581 |
| delta_Rv0954 | -0.72 | -3.635 |
| PonA1 | -1.868 | -3.624 |
| EccD1_KO | -0.312 | -2.447 |
| EspI_KO | -0.405 | -1.258 |
| PE35_KO | -0.618 | -0.557 |
| PPE68_KO | -0.71 | -1.51 |
| glycerol2 | -0.38 | -4.89 |
| lignocerate | -0.095 | -1.422 |
| oleate | -0.997 | -3.927 |
| phosphatidylcholine | 0.028 | -2.553 |
| acetate | -0.239 | -0.17 |
| glucAc | 0.007 | -0.089 |
| Rv0950ko | 0.024 | -3.986 |
| Rv1096ko | -0.365 | 1.674 |
| Rv3684ko | 0.111 | 0.082 |
| delta_otsA_trehalose | 0.083 | -0.532 |