Top 10 genes with highest correlation to Rv1386/PE15:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1387/PPE20 | (cc=0.7952) | info on Rv1387/PPE20 |
| Rv0644c/mmaA2 | (cc=0.6834) | info on Rv0644c/mmaA2 |
| Rv3842c/glpQ1 | (cc=0.6288) | info on Rv3842c/glpQ1 |
| Rv3689/- | (cc=0.62) | info on Rv3689/- |
| Rv2350c/plcB | (cc=0.6125) | info on Rv2350c/plcB |
| Rv0645c/mmaA1 | (cc=0.6094) | info on Rv0645c/mmaA1 |
| Rv0473/- | (cc=0.5864) | info on Rv0473/- |
| Rv1616/- | (cc=0.5843) | info on Rv1616/- |
| Rv1335/cysO | (cc=0.5842) | info on Rv1335/cysO |
| Rv1500/- | (cc=0.5698) | info on Rv1500/- |
Correlation of Rv1386/PE15 with Rv1500/-
Normalized LFCs for Rv1386/PE15:
(description and provenance of datasets)
| Rv1386/PE15 | Rv1500/- | |
| Fe_supp_jason_reseq | -1.362 | 0.172 |
| low_pH_jason_reseq | -0.843 | -0.586 |
| NO_jason_reseq | -1.089 | -0.446 |
| B6_jason_reseq | 0.498 | -0.01 |
| MHCII_jason_reseq | -1.556 | 0.098 |
| Isoniazid02 | -0.748 | -0.473 |
| Rifampicin4 | 0.68 | -0.796 |
| Ethambutol3 | -0.547 | -0.894 |
| Meropenem3 | 0.139 | 0.685 |
| Vancomycin16 | -0.395 | -0.841 |
| Rv2680_day32 | 0.313 | -0.08 |
| H37Rv_KO_MarP | -2.023 | -0.391 |
| hypoxia_3wks | 1.332 | -0.108 |
| hypoxia_6wks | 2.063 | 0.234 |
| glycerol | -1.135 | -1.131 |
| cholesterol | -0.999 | -0.784 |
| AJ | -0.617 | 0.531 |
| Bibs02 | 0.082 | 0.385 |
| Bibs02c | -1.864 | 0.674 |
| BL6 | -0.727 | 1.36 |
| BL6a | 0.317 | 1.39 |
| BXD01 | 1.356 | 1.048 |
| BXD010 | 1.237 | 1.108 |
| BXD011 | 1.489 | 1.41 |
| BXD03 | 0.745 | 0.918 |
| BXD04 | 1.303 | 0.882 |
| BXD05 | 1.892 | 1.222 |
| BXD06 | 1.912 | 1.498 |
| BXD07 | 0.627 | 1.011 |
| BXD08 | 1.767 | 1.618 |
| BXD09 | 1.311 | 1.389 |
| CAST | 1.997 | 1.059 |
| CCcont | -0.812 | 1.057 |
| DS01 | -2.031 | 0.366 |
| DS02 | -1.739 | 0.517 |
| DS04 | 0.107 | 0.146 |
| DS0c | -1.673 | 0.919 |
| GP01 | 1.877 | 1.618 |
| GP02 | 1.883 | 0.833 |
| GP0c | 1.156 | 0.748 |
| NOD | 1.508 | 1.233 |
| NZO | -1.295 | 0.27 |
| PWK | 0.114 | 0.601 |
| H37Rv_KO_CtpC | 2.071 | 1.204 |
| H37Rv_KO_CtpD | 1.777 | 1.362 |
| H37Rv_KO_Rv1272 | 0.542 | 1.369 |
| H37Rv_KO_SugABC | 1.424 | 1.232 |
| H37Rv_KO_MbtN | 0.502 | 0.936 |
| Trans05 | 0.483 | 0.275 |
| macrophage_unactivated | -0.669 | 0.527 |
| IL1 | -1.735 | 0.0 |
| Rapamycin | -1.998 | 0.184 |
| Tcell | 0.723 | 0.759 |
| GMCSF | -0.412 | 0.217 |
| IFNab | -0.886 | 0.024 |
| IFNg | 0.192 | 0.315 |
| IFNg_GMCSF1 | 0.226 | 0.327 |
| Rv1432_day32 | 0.984 | 0.289 |
| Rv1565c_day32 | -1.099 | 0.757 |
| secA2_input | -2.109 | -0.513 |
| delta_Rv3594 | -0.817 | -0.145 |
| delta_Rv3717 | 0.999 | -0.57 |
| delta_Rv3811 | -0.596 | -0.474 |
| delta_Rv0954 | -1.097 | 0.09 |
| PonA1 | -1.627 | -0.269 |
| EccD1_KO | -0.898 | -0.263 |
| EspI_KO | -1.862 | -0.171 |
| PE35_KO | -1.502 | 0.029 |
| PPE68_KO | -1.565 | 0.061 |
| glycerol2 | -0.028 | 0.748 |
| lignocerate | -0.177 | 0.804 |
| oleate | -0.13 | 0.57 |
| phosphatidylcholine | 0.259 | 0.969 |
| acetate | -0.825 | -0.12 |
| glucAc | -0.649 | -0.042 |
| Rv0950ko | -0.314 | 0.1 |
| Rv1096ko | -0.775 | -0.7 |
| Rv3684ko | -0.858 | -0.308 |
| delta_otsA_trehalose | -1.238 | 0.147 |