Top 10 genes with highest correlation to Rv1386/PE15:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1387/PPE20 | (cc=0.7952) | info on Rv1387/PPE20 |
| Rv0644c/mmaA2 | (cc=0.6834) | info on Rv0644c/mmaA2 |
| Rv3842c/glpQ1 | (cc=0.6288) | info on Rv3842c/glpQ1 |
| Rv3689/- | (cc=0.62) | info on Rv3689/- |
| Rv2350c/plcB | (cc=0.6125) | info on Rv2350c/plcB |
| Rv0645c/mmaA1 | (cc=0.6094) | info on Rv0645c/mmaA1 |
| Rv0473/- | (cc=0.5864) | info on Rv0473/- |
| Rv1616/- | (cc=0.5843) | info on Rv1616/- |
| Rv1335/cysO | (cc=0.5842) | info on Rv1335/cysO |
| Rv1500/- | (cc=0.5698) | info on Rv1500/- |
Correlation of Rv1386/PE15 with Rv0473/-
Normalized LFCs for Rv1386/PE15:
(description and provenance of datasets)
| Rv1386/PE15 | Rv0473/- | |
| Fe_supp_jason_reseq | -1.362 | 0.0 |
| low_pH_jason_reseq | -0.843 | -0.89 |
| NO_jason_reseq | -1.089 | 1.423 |
| B6_jason_reseq | 0.498 | 0.131 |
| MHCII_jason_reseq | -1.556 | 0.389 |
| Isoniazid02 | -0.748 | -0.725 |
| Rifampicin4 | 0.68 | -0.149 |
| Ethambutol3 | -0.547 | 0.198 |
| Meropenem3 | 0.139 | 0.93 |
| Vancomycin16 | -0.395 | -0.419 |
| Rv2680_day32 | 0.313 | 2.661 |
| H37Rv_KO_MarP | -2.023 | 0.428 |
| hypoxia_3wks | 1.332 | 0.961 |
| hypoxia_6wks | 2.063 | 1.036 |
| glycerol | -1.135 | -0.275 |
| cholesterol | -0.999 | -0.604 |
| AJ | -0.617 | -0.247 |
| Bibs02 | 0.082 | -0.526 |
| Bibs02c | -1.864 | 0.629 |
| BL6 | -0.727 | 0.909 |
| BL6a | 0.317 | 1.469 |
| BXD01 | 1.356 | 1.895 |
| BXD010 | 1.237 | 1.942 |
| BXD011 | 1.489 | 2.878 |
| BXD03 | 0.745 | 0.943 |
| BXD04 | 1.303 | 1.926 |
| BXD05 | 1.892 | 1.727 |
| BXD06 | 1.912 | 2.558 |
| BXD07 | 0.627 | 2.011 |
| BXD08 | 1.767 | 1.493 |
| BXD09 | 1.311 | 2.018 |
| CAST | 1.997 | -0.716 |
| CCcont | -0.812 | 0.507 |
| DS01 | -2.031 | -0.638 |
| DS02 | -1.739 | -0.128 |
| DS04 | 0.107 | 0.219 |
| DS0c | -1.673 | 0.112 |
| GP01 | 1.877 | 2.656 |
| GP02 | 1.883 | 3.016 |
| GP0c | 1.156 | 2.1 |
| NOD | 1.508 | -0.197 |
| NZO | -1.295 | 0.871 |
| PWK | 0.114 | 1.182 |
| H37Rv_KO_CtpC | 2.071 | 0.271 |
| H37Rv_KO_CtpD | 1.777 | 0.745 |
| H37Rv_KO_Rv1272 | 0.542 | 0.794 |
| H37Rv_KO_SugABC | 1.424 | 0.687 |
| H37Rv_KO_MbtN | 0.502 | 1.304 |
| Trans05 | 0.483 | 1.506 |
| macrophage_unactivated | -0.669 | -0.417 |
| IL1 | -1.735 | -0.16 |
| Rapamycin | -1.998 | 0.402 |
| Tcell | 0.723 | 0.671 |
| GMCSF | -0.412 | 1.088 |
| IFNab | -0.886 | 0.145 |
| IFNg | 0.192 | 0.7 |
| IFNg_GMCSF1 | 0.226 | 0.289 |
| Rv1432_day32 | 0.984 | 4.594 |
| Rv1565c_day32 | -1.099 | 0.291 |
| secA2_input | -2.109 | -0.122 |
| delta_Rv3594 | -0.817 | -0.381 |
| delta_Rv3717 | 0.999 | 1.081 |
| delta_Rv3811 | -0.596 | 0.476 |
| delta_Rv0954 | -1.097 | -0.379 |
| PonA1 | -1.627 | 0.048 |
| EccD1_KO | -0.898 | 0.5 |
| EspI_KO | -1.862 | -0.428 |
| PE35_KO | -1.502 | -0.438 |
| PPE68_KO | -1.565 | -1.046 |
| glycerol2 | -0.028 | 0.555 |
| lignocerate | -0.177 | 0.317 |
| oleate | -0.13 | 0.939 |
| phosphatidylcholine | 0.259 | 0.402 |
| acetate | -0.825 | -0.841 |
| glucAc | -0.649 | 1.132 |
| Rv0950ko | -0.314 | 0.407 |
| Rv1096ko | -0.775 | -0.416 |
| Rv3684ko | -0.858 | 0.016 |
| delta_otsA_trehalose | -1.238 | -0.326 |