Top 10 genes with highest correlation to Rv1343c/lprD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2195/qcrA | (cc=0.4743) | info on Rv2195/qcrA |
| Rv2275/- | (cc=0.4682) | info on Rv2275/- |
| Rv1023/eno | (cc=0.4601) | info on Rv1023/eno |
| Rv2492/- | (cc=0.4304) | info on Rv2492/- |
| Rv2977c/thiL | (cc=0.4293) | info on Rv2977c/thiL |
| Rv1578c/- | (cc=0.4165) | info on Rv1578c/- |
| Rv0455c/- | (cc=0.4135) | info on Rv0455c/- |
| Rv2746c/pgsA3 | (cc=0.4047) | info on Rv2746c/pgsA3 |
| Rv1608c/bcpB | (cc=0.3899) | info on Rv1608c/bcpB |
| Rv2778c/- | (cc=0.387) | info on Rv2778c/- |
Correlation of Rv1343c/lprD with Rv2275/-
Normalized LFCs for Rv1343c/lprD:
(description and provenance of datasets)
| Rv1343c/lprD | Rv2275/- | |
| Fe_supp_jason_reseq | 0.854 | 0.827 |
| low_pH_jason_reseq | -0.231 | 0.617 |
| NO_jason_reseq | 0.633 | -0.244 |
| B6_jason_reseq | -0.153 | -0.7 |
| MHCII_jason_reseq | -0.135 | 0.61 |
| Isoniazid02 | 0.093 | 0.153 |
| Rifampicin4 | 0.173 | 0.975 |
| Ethambutol3 | -0.258 | 0.188 |
| Meropenem3 | 0.22 | 0.352 |
| Vancomycin16 | 0.17 | 0.539 |
| Rv2680_day32 | -0.131 | -0.471 |
| H37Rv_KO_MarP | -0.095 | 0.08 |
| hypoxia_3wks | 0.0 | 0.128 |
| hypoxia_6wks | 0.0 | -0.288 |
| glycerol | 0.0 | -0.453 |
| cholesterol | -0.276 | 0.184 |
| AJ | -0.212 | 0.294 |
| Bibs02 | -0.348 | 1.13 |
| Bibs02c | -0.399 | -0.47 |
| BL6 | -0.238 | 0.864 |
| BL6a | -0.181 | 0.528 |
| BXD01 | -0.248 | 1.203 |
| BXD010 | -0.244 | 0.816 |
| BXD011 | -0.116 | 1.745 |
| BXD03 | -0.258 | 1.025 |
| BXD04 | -0.236 | 0.0 |
| BXD05 | -0.256 | 0.615 |
| BXD06 | -0.254 | 0.39 |
| BXD07 | -0.264 | 0.602 |
| BXD08 | -0.253 | 0.871 |
| BXD09 | -0.128 | 1.087 |
| CAST | -0.439 | -1.054 |
| CCcont | -0.285 | 1.179 |
| DS01 | 0.0 | 0.503 |
| DS02 | -0.199 | 0.142 |
| DS04 | -0.37 | 0.929 |
| DS0c | -0.413 | -0.231 |
| GP01 | -0.188 | -0.354 |
| GP02 | -0.076 | -0.523 |
| GP0c | -0.119 | -0.986 |
| NOD | -0.428 | -0.239 |
| NZO | 1.357 | 1.306 |
| PWK | -0.179 | -1.232 |
| H37Rv_KO_CtpC | -0.148 | 1.545 |
| H37Rv_KO_CtpD | 1.298 | 1.255 |
| H37Rv_KO_Rv1272 | -0.269 | 2.719 |
| H37Rv_KO_SugABC | -0.189 | 2.705 |
| H37Rv_KO_MbtN | 2.159 | 1.924 |
| Trans05 | -0.249 | 1.729 |
| macrophage_unactivated | 0.0 | 1.215 |
| IL1 | 0.0 | -0.089 |
| Rapamycin | 0.0 | 1.114 |
| Tcell | 0.0 | 0.873 |
| GMCSF | 0.0 | 0.51 |
| IFNab | 0.0 | 0.088 |
| IFNg | 0.0 | 0.516 |
| IFNg_GMCSF1 | 0.0 | -1.656 |
| Rv1432_day32 | 0.0 | -0.411 |
| Rv1565c_day32 | -0.415 | 0.3 |
| secA2_input | -0.528 | -1.681 |
| delta_Rv3594 | -1.981 | -0.725 |
| delta_Rv3717 | 0.065 | -0.927 |
| delta_Rv3811 | -0.754 | -0.796 |
| delta_Rv0954 | -0.559 | -1.708 |
| PonA1 | -1.495 | -0.936 |
| EccD1_KO | 1.145 | 2.111 |
| EspI_KO | 0.687 | 1.443 |
| PE35_KO | 0.368 | 1.17 |
| PPE68_KO | 0.771 | 1.872 |
| glycerol2 | 0.0 | 0.0 |
| lignocerate | 0.0 | 0.505 |
| oleate | 0.0 | 0.0 |
| phosphatidylcholine | 0.0 | 0.415 |
| acetate | 0.0 | 1.014 |
| glucAc | 0.0 | 0.487 |
| Rv0950ko | -0.262 | -1.354 |
| Rv1096ko | -0.844 | -0.835 |
| Rv3684ko | -2.057 | -1.179 |
| delta_otsA_trehalose | 0.0 | -0.836 |