Top 10 genes with highest correlation to Rv1343c/lprD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2195/qcrA | (cc=0.4743) | info on Rv2195/qcrA |
| Rv2275/- | (cc=0.4682) | info on Rv2275/- |
| Rv1023/eno | (cc=0.4601) | info on Rv1023/eno |
| Rv2492/- | (cc=0.4304) | info on Rv2492/- |
| Rv2977c/thiL | (cc=0.4293) | info on Rv2977c/thiL |
| Rv1578c/- | (cc=0.4165) | info on Rv1578c/- |
| Rv0455c/- | (cc=0.4135) | info on Rv0455c/- |
| Rv2746c/pgsA3 | (cc=0.4047) | info on Rv2746c/pgsA3 |
| Rv1608c/bcpB | (cc=0.3899) | info on Rv1608c/bcpB |
| Rv2778c/- | (cc=0.387) | info on Rv2778c/- |
Correlation of Rv1343c/lprD with Rv1578c/-
Normalized LFCs for Rv1343c/lprD:
(description and provenance of datasets)
| Rv1343c/lprD | Rv1578c/- | |
| Fe_supp_jason_reseq | 0.854 | 2.344 |
| low_pH_jason_reseq | -0.231 | 0.0 |
| NO_jason_reseq | 0.633 | 0.0 |
| B6_jason_reseq | -0.153 | 0.0 |
| MHCII_jason_reseq | -0.135 | 0.0 |
| Isoniazid02 | 0.093 | 0.904 |
| Rifampicin4 | 0.173 | -0.653 |
| Ethambutol3 | -0.258 | -0.293 |
| Meropenem3 | 0.22 | -0.289 |
| Vancomycin16 | 0.17 | 0.284 |
| Rv2680_day32 | -0.131 | -1.066 |
| H37Rv_KO_MarP | -0.095 | 1.197 |
| hypoxia_3wks | 0.0 | 0.0 |
| hypoxia_6wks | 0.0 | 1.063 |
| glycerol | 0.0 | -0.709 |
| cholesterol | -0.276 | -0.509 |
| AJ | -0.212 | 0.324 |
| Bibs02 | -0.348 | -0.294 |
| Bibs02c | -0.399 | -0.735 |
| BL6 | -0.238 | -0.439 |
| BL6a | -0.181 | 1.116 |
| BXD01 | -0.248 | -0.101 |
| BXD010 | -0.244 | 3.111 |
| BXD011 | -0.116 | 1.612 |
| BXD03 | -0.258 | 0.432 |
| BXD04 | -0.236 | 0.8 |
| BXD05 | -0.256 | 0.354 |
| BXD06 | -0.254 | 0.0 |
| BXD07 | -0.264 | 0.281 |
| BXD08 | -0.253 | 0.628 |
| BXD09 | -0.128 | 0.729 |
| CAST | -0.439 | 1.753 |
| CCcont | -0.285 | -0.525 |
| DS01 | 0.0 | 0.621 |
| DS02 | -0.199 | 0.695 |
| DS04 | -0.37 | -0.682 |
| DS0c | -0.413 | -0.168 |
| GP01 | -0.188 | -0.347 |
| GP02 | -0.076 | -0.134 |
| GP0c | -0.119 | -0.209 |
| NOD | -0.428 | 0.163 |
| NZO | 1.357 | 0.637 |
| PWK | -0.179 | 1.992 |
| H37Rv_KO_CtpC | -0.148 | -0.571 |
| H37Rv_KO_CtpD | 1.298 | -0.204 |
| H37Rv_KO_Rv1272 | -0.269 | -0.495 |
| H37Rv_KO_SugABC | -0.189 | -0.348 |
| H37Rv_KO_MbtN | 2.159 | -0.362 |
| Trans05 | -0.249 | -0.459 |
| macrophage_unactivated | 0.0 | -0.972 |
| IL1 | 0.0 | 2.625 |
| Rapamycin | 0.0 | 4.125 |
| Tcell | 0.0 | 1.528 |
| GMCSF | 0.0 | 1.133 |
| IFNab | 0.0 | 1.04 |
| IFNg | 0.0 | 1.462 |
| IFNg_GMCSF1 | 0.0 | 3.142 |
| Rv1432_day32 | 0.0 | 0.531 |
| Rv1565c_day32 | -0.415 | -1.106 |
| secA2_input | -0.528 | -0.089 |
| delta_Rv3594 | -1.981 | -1.137 |
| delta_Rv3717 | 0.065 | -1.058 |
| delta_Rv3811 | -0.754 | -2.022 |
| delta_Rv0954 | -0.559 | -2.097 |
| PonA1 | -1.495 | -1.176 |
| EccD1_KO | 1.145 | 2.111 |
| EspI_KO | 0.687 | 2.036 |
| PE35_KO | 0.368 | 2.832 |
| PPE68_KO | 0.771 | 1.811 |
| glycerol2 | 0.0 | -2.008 |
| lignocerate | 0.0 | -1.745 |
| oleate | 0.0 | -1.836 |
| phosphatidylcholine | 0.0 | -1.814 |
| acetate | 0.0 | -0.973 |
| glucAc | 0.0 | -1.481 |
| Rv0950ko | -0.262 | -1.655 |
| Rv1096ko | -0.844 | -2.874 |
| Rv3684ko | -2.057 | -4.962 |
| delta_otsA_trehalose | 0.0 | 0.0 |