Top 10 genes with highest correlation to Rv1333/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1337/- | (cc=0.8027) | info on Rv1337/- |
| Rv1336/cysM | (cc=0.7626) | info on Rv1336/cysM |
| Rv1335/cysO | (cc=0.759) | info on Rv1335/cysO |
| Rv1334/mec | (cc=0.7033) | info on Rv1334/mec |
| Rv0502/- | (cc=0.656) | info on Rv0502/- |
| Rv3150/nuoF | (cc=0.6515) | info on Rv3150/nuoF |
| Rv3036c/TB22.2 | (cc=0.6444) | info on Rv3036c/TB22.2 |
| Rv3151/nuoG | (cc=0.642) | info on Rv3151/nuoG |
| Rv0181c/- | (cc=0.6051) | info on Rv0181c/- |
| Rv3218/- | (cc=0.6037) | info on Rv3218/- |
Correlation of Rv1333/- with Rv1336/cysM
Normalized LFCs for Rv1333/-:
(description and provenance of datasets)
| Rv1333/- | Rv1336/cysM | |
| Fe_supp_jason_reseq | 0.259 | 0.199 |
| low_pH_jason_reseq | 0.161 | 0.831 |
| NO_jason_reseq | 0.819 | 1.113 |
| B6_jason_reseq | -0.371 | 0.705 |
| MHCII_jason_reseq | 0.363 | -0.079 |
| Isoniazid02 | -0.631 | 1.385 |
| Rifampicin4 | 1.032 | 0.076 |
| Ethambutol3 | -1.364 | -0.593 |
| Meropenem3 | -0.654 | 0.628 |
| Vancomycin16 | 0.531 | 0.666 |
| Rv2680_day32 | 0.36 | 0.675 |
| H37Rv_KO_MarP | -0.557 | -0.425 |
| hypoxia_3wks | 0.941 | 2.213 |
| hypoxia_6wks | 1.351 | 4.042 |
| glycerol | -0.718 | -0.967 |
| cholesterol | 0.574 | 0.048 |
| AJ | -1.375 | -1.56 |
| Bibs02 | -0.898 | -1.444 |
| Bibs02c | -0.153 | -1.203 |
| BL6 | 0.9 | 1.43 |
| BL6a | 0.865 | 1.05 |
| BXD01 | 1.833 | 2.221 |
| BXD010 | 1.317 | 1.974 |
| BXD011 | 1.36 | 3.102 |
| BXD03 | 1.786 | 1.156 |
| BXD04 | 1.307 | 1.994 |
| BXD05 | 1.887 | 1.724 |
| BXD06 | 1.352 | 2.328 |
| BXD07 | 1.468 | 2.6 |
| BXD08 | 1.477 | 2.71 |
| BXD09 | 1.215 | 1.771 |
| CAST | -1.094 | -0.594 |
| CCcont | 1.089 | 0.248 |
| DS01 | -0.775 | -1.632 |
| DS02 | -0.654 | -1.306 |
| DS04 | -0.121 | -0.136 |
| DS0c | -0.624 | -1.194 |
| GP01 | 1.29 | 1.134 |
| GP02 | 0.762 | 0.251 |
| GP0c | 1.388 | 1.595 |
| NOD | -1.865 | -1.128 |
| NZO | -0.189 | 0.23 |
| PWK | -0.871 | -0.469 |
| H37Rv_KO_CtpC | -0.578 | -0.578 |
| H37Rv_KO_CtpD | 0.336 | 0.006 |
| H37Rv_KO_Rv1272 | 1.244 | 1.298 |
| H37Rv_KO_SugABC | 1.968 | 0.836 |
| H37Rv_KO_MbtN | 1.498 | 2.209 |
| Trans05 | 0.051 | 1.733 |
| macrophage_unactivated | -0.492 | -2.061 |
| IL1 | 0.596 | -0.163 |
| Rapamycin | 0.853 | -0.915 |
| Tcell | 0.688 | 0.29 |
| GMCSF | -0.565 | -1.428 |
| IFNab | 0.441 | 0.115 |
| IFNg | 0.334 | -0.901 |
| IFNg_GMCSF1 | 0.157 | -1.024 |
| Rv1432_day32 | 0.595 | 0.846 |
| Rv1565c_day32 | -0.753 | -1.439 |
| secA2_input | 0.083 | 0.227 |
| delta_Rv3594 | 0.971 | 0.858 |
| delta_Rv3717 | 1.592 | 2.129 |
| delta_Rv3811 | 0.708 | 1.103 |
| delta_Rv0954 | -0.548 | -0.291 |
| PonA1 | -0.517 | -0.995 |
| EccD1_KO | -0.895 | 0.22 |
| EspI_KO | -0.804 | 0.088 |
| PE35_KO | -1.304 | -0.715 |
| PPE68_KO | -0.969 | 0.016 |
| glycerol2 | -0.184 | -0.206 |
| lignocerate | -0.728 | -2.133 |
| oleate | 2.294 | 2.606 |
| phosphatidylcholine | -0.541 | -1.732 |
| acetate | -0.288 | -0.073 |
| glucAc | 0.446 | -0.255 |
| Rv0950ko | -0.413 | -0.633 |
| Rv1096ko | 0.054 | -0.305 |
| Rv3684ko | -0.481 | 0.308 |
| delta_otsA_trehalose | 0.747 | -0.053 |