Top 10 genes with highest correlation to Rv1333/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1337/- | (cc=0.8027) | info on Rv1337/- |
| Rv1336/cysM | (cc=0.7626) | info on Rv1336/cysM |
| Rv1335/cysO | (cc=0.759) | info on Rv1335/cysO |
| Rv1334/mec | (cc=0.7033) | info on Rv1334/mec |
| Rv0502/- | (cc=0.656) | info on Rv0502/- |
| Rv3150/nuoF | (cc=0.6515) | info on Rv3150/nuoF |
| Rv3036c/TB22.2 | (cc=0.6444) | info on Rv3036c/TB22.2 |
| Rv3151/nuoG | (cc=0.642) | info on Rv3151/nuoG |
| Rv0181c/- | (cc=0.6051) | info on Rv0181c/- |
| Rv3218/- | (cc=0.6037) | info on Rv3218/- |
Correlation of Rv1333/- with Rv1335/cysO
Normalized LFCs for Rv1333/-:
(description and provenance of datasets)
| Rv1333/- | Rv1335/cysO | |
| Fe_supp_jason_reseq | 0.259 | -0.205 |
| low_pH_jason_reseq | 0.161 | 1.85 |
| NO_jason_reseq | 0.819 | 1.273 |
| B6_jason_reseq | -0.371 | 1.058 |
| MHCII_jason_reseq | 0.363 | -0.572 |
| Isoniazid02 | -0.631 | -0.207 |
| Rifampicin4 | 1.032 | 1.145 |
| Ethambutol3 | -1.364 | -1.267 |
| Meropenem3 | -0.654 | -0.089 |
| Vancomycin16 | 0.531 | 0.377 |
| Rv2680_day32 | 0.36 | -0.382 |
| H37Rv_KO_MarP | -0.557 | -0.628 |
| hypoxia_3wks | 0.941 | 1.547 |
| hypoxia_6wks | 1.351 | 2.76 |
| glycerol | -0.718 | -1.404 |
| cholesterol | 0.574 | -1.103 |
| AJ | -1.375 | -0.819 |
| Bibs02 | -0.898 | -0.375 |
| Bibs02c | -0.153 | 1.058 |
| BL6 | 0.9 | 1.805 |
| BL6a | 0.865 | 1.578 |
| BXD01 | 1.833 | 1.794 |
| BXD010 | 1.317 | 2.143 |
| BXD011 | 1.36 | 2.581 |
| BXD03 | 1.786 | 1.328 |
| BXD04 | 1.307 | 1.063 |
| BXD05 | 1.887 | 2.237 |
| BXD06 | 1.352 | 1.975 |
| BXD07 | 1.468 | 1.892 |
| BXD08 | 1.477 | 1.74 |
| BXD09 | 1.215 | 1.611 |
| CAST | -1.094 | -1.974 |
| CCcont | 1.089 | 0.075 |
| DS01 | -0.775 | -0.809 |
| DS02 | -0.654 | -1.09 |
| DS04 | -0.121 | 0.655 |
| DS0c | -0.624 | -0.754 |
| GP01 | 1.29 | 1.708 |
| GP02 | 0.762 | 3.674 |
| GP0c | 1.388 | 1.509 |
| NOD | -1.865 | -0.605 |
| NZO | -0.189 | 1.053 |
| PWK | -0.871 | -1.204 |
| H37Rv_KO_CtpC | -0.578 | 0.487 |
| H37Rv_KO_CtpD | 0.336 | 1.144 |
| H37Rv_KO_Rv1272 | 1.244 | 1.102 |
| H37Rv_KO_SugABC | 1.968 | 2.017 |
| H37Rv_KO_MbtN | 1.498 | 1.675 |
| Trans05 | 0.051 | 1.853 |
| macrophage_unactivated | -0.492 | -1.016 |
| IL1 | 0.596 | -0.448 |
| Rapamycin | 0.853 | 0.114 |
| Tcell | 0.688 | -0.329 |
| GMCSF | -0.565 | -1.803 |
| IFNab | 0.441 | -0.272 |
| IFNg | 0.334 | -0.275 |
| IFNg_GMCSF1 | 0.157 | -0.867 |
| Rv1432_day32 | 0.595 | 1.035 |
| Rv1565c_day32 | -0.753 | -1.854 |
| secA2_input | 0.083 | -1.025 |
| delta_Rv3594 | 0.971 | -0.289 |
| delta_Rv3717 | 1.592 | 1.003 |
| delta_Rv3811 | 0.708 | -0.083 |
| delta_Rv0954 | -0.548 | -1.016 |
| PonA1 | -0.517 | -1.772 |
| EccD1_KO | -0.895 | -0.924 |
| EspI_KO | -0.804 | 0.108 |
| PE35_KO | -1.304 | -1.68 |
| PPE68_KO | -0.969 | -1.459 |
| glycerol2 | -0.184 | -0.37 |
| lignocerate | -0.728 | -1.583 |
| oleate | 2.294 | 2.205 |
| phosphatidylcholine | -0.541 | -0.919 |
| acetate | -0.288 | 0.165 |
| glucAc | 0.446 | -0.703 |
| Rv0950ko | -0.413 | -0.163 |
| Rv1096ko | 0.054 | -0.787 |
| Rv3684ko | -0.481 | -0.233 |
| delta_otsA_trehalose | 0.747 | 1.062 |