Top 10 genes with highest correlation to Rv1330c/pncB1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3256c/- | (cc=0.417) | info on Rv3256c/- |
| Rv1356c/- | (cc=0.3937) | info on Rv1356c/- |
| Rv2222c/glnA2 | (cc=0.3824) | info on Rv2222c/glnA2 |
| Rv0544c/- | (cc=0.3749) | info on Rv0544c/- |
| Rv0540/- | (cc=0.3641) | info on Rv0540/- |
| Rv2287/yjcE | (cc=0.362) | info on Rv2287/yjcE |
| Rv2826c/- | (cc=0.3609) | info on Rv2826c/- |
| Rv0202c/mmpL11 | (cc=0.3574) | info on Rv0202c/mmpL11 |
| Rv2866/relG | (cc=0.3497) | info on Rv2866/relG |
| Rv2420c/- | (cc=0.347) | info on Rv2420c/- |
Correlation of Rv1330c/pncB1 with Rv2826c/-
Normalized LFCs for Rv1330c/pncB1:
(description and provenance of datasets)
| Rv1330c/pncB1 | Rv2826c/- | |
| Fe_supp_jason_reseq | 0.077 | -1.634 |
| low_pH_jason_reseq | -0.279 | -0.102 |
| NO_jason_reseq | -0.99 | -0.378 |
| B6_jason_reseq | -0.348 | -0.895 |
| MHCII_jason_reseq | 0.768 | -0.351 |
| Isoniazid02 | 0.595 | -0.498 |
| Rifampicin4 | 0.523 | -0.56 |
| Ethambutol3 | 0.197 | -0.781 |
| Meropenem3 | 0.266 | 2.933 |
| Vancomycin16 | 0.687 | -0.138 |
| Rv2680_day32 | -0.105 | -0.069 |
| H37Rv_KO_MarP | -0.278 | -0.341 |
| hypoxia_3wks | 0.283 | 0.443 |
| hypoxia_6wks | -0.177 | -0.251 |
| glycerol | 0.664 | -0.404 |
| cholesterol | 0.194 | 0.089 |
| AJ | 0.412 | -1.498 |
| Bibs02 | 1.139 | 1.178 |
| Bibs02c | 0.937 | 0.79 |
| BL6 | -0.854 | -0.851 |
| BL6a | 0.123 | 0.408 |
| BXD01 | -0.36 | -1.029 |
| BXD010 | 0.288 | -2.727 |
| BXD011 | -0.134 | -0.552 |
| BXD03 | -0.242 | -0.46 |
| BXD04 | -0.121 | -0.737 |
| BXD05 | -0.141 | -1.229 |
| BXD06 | -0.109 | 0.486 |
| BXD07 | 0.455 | -1.493 |
| BXD08 | -0.183 | -1.025 |
| BXD09 | -0.402 | -1.224 |
| CAST | -0.394 | -1.094 |
| CCcont | -0.319 | -1.77 |
| DS01 | -0.212 | 0.284 |
| DS02 | -1.454 | -0.143 |
| DS04 | 0.85 | -0.367 |
| DS0c | 0.77 | -0.387 |
| GP01 | 0.132 | 0.427 |
| GP02 | 0.588 | 1.211 |
| GP0c | 0.081 | -0.599 |
| NOD | -1.298 | -1.132 |
| NZO | -0.072 | 0.568 |
| PWK | -0.756 | -0.072 |
| H37Rv_KO_CtpC | 0.08 | -0.36 |
| H37Rv_KO_CtpD | -0.387 | -2.251 |
| H37Rv_KO_Rv1272 | 0.663 | -0.841 |
| H37Rv_KO_SugABC | 0.629 | 0.832 |
| H37Rv_KO_MbtN | 0.662 | -1.165 |
| Trans05 | 0.484 | 0.707 |
| macrophage_unactivated | -0.966 | -4.141 |
| IL1 | -0.104 | -1.391 |
| Rapamycin | -0.663 | -3.069 |
| Tcell | 2.177 | -0.857 |
| GMCSF | -0.57 | -1.79 |
| IFNab | 0.0 | -2.249 |
| IFNg | -0.556 | -1.483 |
| IFNg_GMCSF1 | -0.456 | -0.534 |
| Rv1432_day32 | 0.545 | 0.252 |
| Rv1565c_day32 | -1.706 | -1.434 |
| secA2_input | 0.254 | 0.725 |
| delta_Rv3594 | 0.701 | -0.82 |
| delta_Rv3717 | 0.856 | -0.05 |
| delta_Rv3811 | 0.497 | -0.388 |
| delta_Rv0954 | -0.208 | -0.262 |
| PonA1 | 0.118 | -0.929 |
| EccD1_KO | -0.424 | -1.694 |
| EspI_KO | -0.088 | -1.109 |
| PE35_KO | 0.09 | -0.318 |
| PPE68_KO | -0.202 | -0.627 |
| glycerol2 | -0.369 | 0.119 |
| lignocerate | -0.742 | -0.408 |
| oleate | 0.688 | 0.301 |
| phosphatidylcholine | 0.13 | 0.0 |
| acetate | 0.324 | -0.151 |
| glucAc | -0.033 | -0.569 |
| Rv0950ko | 0.226 | 0.862 |
| Rv1096ko | 0.38 | 2.054 |
| Rv3684ko | 0.544 | 1.808 |
| delta_otsA_trehalose | 0.007 | 0.524 |