Top 10 genes with highest correlation to Rv1330c/pncB1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3256c/- | (cc=0.417) | info on Rv3256c/- |
| Rv1356c/- | (cc=0.3937) | info on Rv1356c/- |
| Rv2222c/glnA2 | (cc=0.3824) | info on Rv2222c/glnA2 |
| Rv0544c/- | (cc=0.3749) | info on Rv0544c/- |
| Rv0540/- | (cc=0.3641) | info on Rv0540/- |
| Rv2287/yjcE | (cc=0.362) | info on Rv2287/yjcE |
| Rv2826c/- | (cc=0.3609) | info on Rv2826c/- |
| Rv0202c/mmpL11 | (cc=0.3574) | info on Rv0202c/mmpL11 |
| Rv2866/relG | (cc=0.3497) | info on Rv2866/relG |
| Rv2420c/- | (cc=0.347) | info on Rv2420c/- |
Correlation of Rv1330c/pncB1 with Rv0540/-
Normalized LFCs for Rv1330c/pncB1:
(description and provenance of datasets)
| Rv1330c/pncB1 | Rv0540/- | |
| Fe_supp_jason_reseq | 0.077 | -0.074 |
| low_pH_jason_reseq | -0.279 | -1.096 |
| NO_jason_reseq | -0.99 | -0.312 |
| B6_jason_reseq | -0.348 | 0.833 |
| MHCII_jason_reseq | 0.768 | -0.506 |
| Isoniazid02 | 0.595 | 0.038 |
| Rifampicin4 | 0.523 | 0.07 |
| Ethambutol3 | 0.197 | 0.122 |
| Meropenem3 | 0.266 | 0.504 |
| Vancomycin16 | 0.687 | 2.406 |
| Rv2680_day32 | -0.105 | -0.833 |
| H37Rv_KO_MarP | -0.278 | -1.228 |
| hypoxia_3wks | 0.283 | 0.443 |
| hypoxia_6wks | -0.177 | -0.526 |
| glycerol | 0.664 | -0.278 |
| cholesterol | 0.194 | 0.973 |
| AJ | 0.412 | -0.424 |
| Bibs02 | 1.139 | 0.532 |
| Bibs02c | 0.937 | 1.634 |
| BL6 | -0.854 | -2.735 |
| BL6a | 0.123 | 0.796 |
| BXD01 | -0.36 | -1.446 |
| BXD010 | 0.288 | -2.013 |
| BXD011 | -0.134 | -0.05 |
| BXD03 | -0.242 | -2.821 |
| BXD04 | -0.121 | -2.096 |
| BXD05 | -0.141 | -0.796 |
| BXD06 | -0.109 | -1.093 |
| BXD07 | 0.455 | -1.76 |
| BXD08 | -0.183 | -1.75 |
| BXD09 | -0.402 | -1.849 |
| CAST | -0.394 | -0.606 |
| CCcont | -0.319 | -2.263 |
| DS01 | -0.212 | 0.866 |
| DS02 | -1.454 | -1.286 |
| DS04 | 0.85 | -0.937 |
| DS0c | 0.77 | 1.09 |
| GP01 | 0.132 | -1.97 |
| GP02 | 0.588 | -0.781 |
| GP0c | 0.081 | -0.893 |
| NOD | -1.298 | 0.719 |
| NZO | -0.072 | -0.558 |
| PWK | -0.756 | 0.239 |
| H37Rv_KO_CtpC | 0.08 | -1.285 |
| H37Rv_KO_CtpD | -0.387 | -2.232 |
| H37Rv_KO_Rv1272 | 0.663 | -0.194 |
| H37Rv_KO_SugABC | 0.629 | -0.4 |
| H37Rv_KO_MbtN | 0.662 | -0.379 |
| Trans05 | 0.484 | -0.2 |
| macrophage_unactivated | -0.966 | -2.743 |
| IL1 | -0.104 | -2.394 |
| Rapamycin | -0.663 | -2.667 |
| Tcell | 2.177 | -0.723 |
| GMCSF | -0.57 | -0.805 |
| IFNab | 0.0 | -3.459 |
| IFNg | -0.556 | -2.157 |
| IFNg_GMCSF1 | -0.456 | -1.678 |
| Rv1432_day32 | 0.545 | 0.0 |
| Rv1565c_day32 | -1.706 | -0.725 |
| secA2_input | 0.254 | -0.302 |
| delta_Rv3594 | 0.701 | -0.515 |
| delta_Rv3717 | 0.856 | -0.052 |
| delta_Rv3811 | 0.497 | -0.355 |
| delta_Rv0954 | -0.208 | -0.876 |
| PonA1 | 0.118 | -0.574 |
| EccD1_KO | -0.424 | -0.645 |
| EspI_KO | -0.088 | 0.288 |
| PE35_KO | 0.09 | -0.403 |
| PPE68_KO | -0.202 | -0.627 |
| glycerol2 | -0.369 | -0.263 |
| lignocerate | -0.742 | -0.8 |
| oleate | 0.688 | 0.343 |
| phosphatidylcholine | 0.13 | 0.049 |
| acetate | 0.324 | -0.79 |
| glucAc | -0.033 | -1.772 |
| Rv0950ko | 0.226 | 0.0 |
| Rv1096ko | 0.38 | 1.221 |
| Rv3684ko | 0.544 | 0.485 |
| delta_otsA_trehalose | 0.007 | -0.422 |