Top 10 genes with highest correlation to Rv1330c/pncB1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3256c/- | (cc=0.417) | info on Rv3256c/- |
| Rv1356c/- | (cc=0.3937) | info on Rv1356c/- |
| Rv2222c/glnA2 | (cc=0.3824) | info on Rv2222c/glnA2 |
| Rv0544c/- | (cc=0.3749) | info on Rv0544c/- |
| Rv0540/- | (cc=0.3641) | info on Rv0540/- |
| Rv2287/yjcE | (cc=0.362) | info on Rv2287/yjcE |
| Rv2826c/- | (cc=0.3609) | info on Rv2826c/- |
| Rv0202c/mmpL11 | (cc=0.3574) | info on Rv0202c/mmpL11 |
| Rv2866/relG | (cc=0.3497) | info on Rv2866/relG |
| Rv2420c/- | (cc=0.347) | info on Rv2420c/- |
Correlation of Rv1330c/pncB1 with Rv3256c/-
Normalized LFCs for Rv1330c/pncB1:
(description and provenance of datasets)
| Rv1330c/pncB1 | Rv3256c/- | |
| Fe_supp_jason_reseq | 0.077 | -0.688 |
| low_pH_jason_reseq | -0.279 | -0.338 |
| NO_jason_reseq | -0.99 | 0.0 |
| B6_jason_reseq | -0.348 | -0.071 |
| MHCII_jason_reseq | 0.768 | 0.977 |
| Isoniazid02 | 0.595 | -1.73 |
| Rifampicin4 | 0.523 | 1.562 |
| Ethambutol3 | 0.197 | -0.23 |
| Meropenem3 | 0.266 | -0.612 |
| Vancomycin16 | 0.687 | -0.207 |
| Rv2680_day32 | -0.105 | -2.899 |
| H37Rv_KO_MarP | -0.278 | -0.291 |
| hypoxia_3wks | 0.283 | -1.782 |
| hypoxia_6wks | -0.177 | -2.518 |
| glycerol | 0.664 | 2.907 |
| cholesterol | 0.194 | -0.055 |
| AJ | 0.412 | -1.477 |
| Bibs02 | 1.139 | 0.42 |
| Bibs02c | 0.937 | 0.418 |
| BL6 | -0.854 | -1.306 |
| BL6a | 0.123 | 0.65 |
| BXD01 | -0.36 | -1.178 |
| BXD010 | 0.288 | -0.816 |
| BXD011 | -0.134 | -0.9 |
| BXD03 | -0.242 | -2.202 |
| BXD04 | -0.121 | -1.725 |
| BXD05 | -0.141 | -1.701 |
| BXD06 | -0.109 | -1.393 |
| BXD07 | 0.455 | -1.59 |
| BXD08 | -0.183 | -1.456 |
| BXD09 | -0.402 | -1.866 |
| CAST | -0.394 | -0.679 |
| CCcont | -0.319 | -0.514 |
| DS01 | -0.212 | -1.668 |
| DS02 | -1.454 | -1.174 |
| DS04 | 0.85 | 1.238 |
| DS0c | 0.77 | -0.343 |
| GP01 | 0.132 | -1.134 |
| GP02 | 0.588 | -1.43 |
| GP0c | 0.081 | -0.205 |
| NOD | -1.298 | -2.031 |
| NZO | -0.072 | -1.636 |
| PWK | -0.756 | -1.458 |
| H37Rv_KO_CtpC | 0.08 | -0.877 |
| H37Rv_KO_CtpD | -0.387 | -1.386 |
| H37Rv_KO_Rv1272 | 0.663 | -0.946 |
| H37Rv_KO_SugABC | 0.629 | 1.043 |
| H37Rv_KO_MbtN | 0.662 | -0.141 |
| Trans05 | 0.484 | 0.0 |
| macrophage_unactivated | -0.966 | 0.338 |
| IL1 | -0.104 | 1.391 |
| Rapamycin | -0.663 | 0.485 |
| Tcell | 2.177 | 0.978 |
| GMCSF | -0.57 | -0.813 |
| IFNab | 0.0 | -0.931 |
| IFNg | -0.556 | 1.849 |
| IFNg_GMCSF1 | -0.456 | 0.647 |
| Rv1432_day32 | 0.545 | -0.727 |
| Rv1565c_day32 | -1.706 | -4.854 |
| secA2_input | 0.254 | -0.712 |
| delta_Rv3594 | 0.701 | 2.47 |
| delta_Rv3717 | 0.856 | 3.651 |
| delta_Rv3811 | 0.497 | 2.668 |
| delta_Rv0954 | -0.208 | 1.009 |
| PonA1 | 0.118 | -0.223 |
| EccD1_KO | -0.424 | -1.365 |
| EspI_KO | -0.088 | -0.856 |
| PE35_KO | 0.09 | -0.957 |
| PPE68_KO | -0.202 | -2.921 |
| glycerol2 | -0.369 | -0.595 |
| lignocerate | -0.742 | -0.024 |
| oleate | 0.688 | -2.393 |
| phosphatidylcholine | 0.13 | -0.69 |
| acetate | 0.324 | 0.324 |
| glucAc | -0.033 | 0.681 |
| Rv0950ko | 0.226 | 1.182 |
| Rv1096ko | 0.38 | 0.63 |
| Rv3684ko | 0.544 | -0.802 |
| delta_otsA_trehalose | 0.007 | -0.965 |