Top 10 genes with highest correlation to Rv1308/atpA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3696c/glpK | (cc=0.5394) | info on Rv3696c/glpK |
| Rv0552/- | (cc=0.5078) | info on Rv0552/- |
| Rv2655c/- | (cc=0.4973) | info on Rv2655c/- |
| Rv0879c/- | (cc=0.4924) | info on Rv0879c/- |
| Rv2709/- | (cc=0.4799) | info on Rv2709/- |
| Rv2334/cysK1 | (cc=0.4791) | info on Rv2334/cysK1 |
| Rv1712/cmk | (cc=0.4749) | info on Rv1712/cmk |
| Rv0362/mgtE | (cc=0.441) | info on Rv0362/mgtE |
| Rv3248c/sahH | (cc=0.4369) | info on Rv3248c/sahH |
| Rv0270/fadD2 | (cc=0.4319) | info on Rv0270/fadD2 |
Correlation of Rv1308/atpA with Rv3696c/glpK
Normalized LFCs for Rv1308/atpA:
(description and provenance of datasets)
| Rv1308/atpA | Rv3696c/glpK | |
| Fe_supp_jason_reseq | 0.655 | 1.778 |
| low_pH_jason_reseq | 4.256 | 6.0 |
| NO_jason_reseq | 3.208 | 6.0 |
| B6_jason_reseq | 1.57 | 6.0 |
| MHCII_jason_reseq | -0.257 | 1.383 |
| Isoniazid02 | 0.0 | -1.455 |
| Rifampicin4 | 0.0 | -1.995 |
| Ethambutol3 | 0.168 | 1.233 |
| Meropenem3 | 0.0 | -0.771 |
| Vancomycin16 | 0.0 | -1.366 |
| Rv2680_day32 | 0.0 | 2.647 |
| H37Rv_KO_MarP | 1.782 | 0.244 |
| hypoxia_3wks | -0.961 | 1.75 |
| hypoxia_6wks | 0.0 | 6.0 |
| glycerol | 0.531 | -5.227 |
| cholesterol | -0.509 | -0.639 |
| AJ | -0.18 | 4.528 |
| Bibs02 | 1.031 | -0.332 |
| Bibs02c | 0.293 | 0.089 |
| BL6 | -0.439 | -1.033 |
| BL6a | -0.499 | 0.664 |
| BXD01 | 1.167 | 1.68 |
| BXD010 | -0.45 | 1.312 |
| BXD011 | 0.407 | 2.299 |
| BXD03 | -0.475 | -0.426 |
| BXD04 | -0.312 | 0.835 |
| BXD05 | 0.636 | 0.526 |
| BXD06 | 0.351 | 2.16 |
| BXD07 | 0.718 | 1.097 |
| BXD08 | -0.214 | 0.628 |
| BXD09 | 0.285 | 1.682 |
| CAST | 0.859 | 5.014 |
| CCcont | -0.525 | -1.866 |
| DS01 | -0.38 | 0.161 |
| DS02 | 0.158 | 0.402 |
| DS04 | 1.093 | 1.456 |
| DS0c | 0.44 | -2.154 |
| GP01 | -0.347 | -2.071 |
| GP02 | -0.21 | -1.551 |
| GP0c | -0.457 | -2.908 |
| NOD | 0.0 | 2.301 |
| NZO | 1.849 | 4.859 |
| PWK | 0.274 | 6.0 |
| H37Rv_KO_CtpC | 0.0 | 0.534 |
| H37Rv_KO_CtpD | 1.135 | 2.55 |
| H37Rv_KO_Rv1272 | -0.495 | -1.936 |
| H37Rv_KO_SugABC | -0.348 | -0.424 |
| H37Rv_KO_MbtN | 0.821 | -0.166 |
| Trans05 | 0.265 | -0.63 |
| macrophage_unactivated | -0.436 | -1.607 |
| IL1 | -0.409 | -1.041 |
| Rapamycin | -0.424 | -1.234 |
| Tcell | 0.411 | 0.596 |
| GMCSF | -0.364 | -2.54 |
| IFNab | -0.417 | -1.061 |
| IFNg | -0.369 | -0.81 |
| IFNg_GMCSF1 | -0.434 | 1.273 |
| Rv1432_day32 | 0.0 | 0.343 |
| Rv1565c_day32 | 0.0 | -0.924 |
| secA2_input | 0.302 | -0.945 |
| delta_Rv3594 | -0.119 | -2.6 |
| delta_Rv3717 | 0.424 | -1.286 |
| delta_Rv3811 | -1.377 | -2.051 |
| delta_Rv0954 | -1.196 | -1.101 |
| PonA1 | -1.069 | 1.358 |
| EccD1_KO | 0.414 | 0.0 |
| EspI_KO | -0.394 | -0.265 |
| PE35_KO | 0.0 | 1.339 |
| PPE68_KO | 0.0 | 0.793 |
| glycerol2 | -1.153 | -2.844 |
| lignocerate | -1.296 | -1.967 |
| oleate | -0.391 | -2.165 |
| phosphatidylcholine | -0.864 | -2.139 |
| acetate | -1.026 | -1.519 |
| glucAc | -1.1 | -1.194 |
| Rv0950ko | 0.416 | -0.874 |
| Rv1096ko | 1.463 | -0.875 |
| Rv3684ko | 1.241 | -0.609 |
| delta_otsA_trehalose | 0.133 | -0.103 |