Top 10 genes with highest correlation to Rv1308/atpA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3696c/glpK | (cc=0.5394) | info on Rv3696c/glpK |
| Rv0552/- | (cc=0.5078) | info on Rv0552/- |
| Rv2655c/- | (cc=0.4973) | info on Rv2655c/- |
| Rv0879c/- | (cc=0.4924) | info on Rv0879c/- |
| Rv2709/- | (cc=0.4799) | info on Rv2709/- |
| Rv2334/cysK1 | (cc=0.4791) | info on Rv2334/cysK1 |
| Rv1712/cmk | (cc=0.4749) | info on Rv1712/cmk |
| Rv0362/mgtE | (cc=0.441) | info on Rv0362/mgtE |
| Rv3248c/sahH | (cc=0.4369) | info on Rv3248c/sahH |
| Rv0270/fadD2 | (cc=0.4319) | info on Rv0270/fadD2 |
Correlation of Rv1308/atpA with Rv0879c/-
Normalized LFCs for Rv1308/atpA:
(description and provenance of datasets)
| Rv1308/atpA | Rv0879c/- | |
| Fe_supp_jason_reseq | 0.655 | -0.39 |
| low_pH_jason_reseq | 4.256 | 3.554 |
| NO_jason_reseq | 3.208 | 3.085 |
| B6_jason_reseq | 1.57 | 2.785 |
| MHCII_jason_reseq | -0.257 | -0.487 |
| Isoniazid02 | 0.0 | 2.165 |
| Rifampicin4 | 0.0 | -1.313 |
| Ethambutol3 | 0.168 | 0.593 |
| Meropenem3 | 0.0 | -0.292 |
| Vancomycin16 | 0.0 | -1.151 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | 1.782 | 0.106 |
| hypoxia_3wks | -0.961 | -4.37 |
| hypoxia_6wks | 0.0 | 1.188 |
| glycerol | 0.531 | -0.906 |
| cholesterol | -0.509 | -0.762 |
| AJ | -0.18 | -2.397 |
| Bibs02 | 1.031 | -2.787 |
| Bibs02c | 0.293 | 0.0 |
| BL6 | -0.439 | -1.907 |
| BL6a | -0.499 | 2.642 |
| BXD01 | 1.167 | 2.363 |
| BXD010 | -0.45 | 0.329 |
| BXD011 | 0.407 | 3.301 |
| BXD03 | -0.475 | 0.268 |
| BXD04 | -0.312 | 0.611 |
| BXD05 | 0.636 | 2.006 |
| BXD06 | 0.351 | 1.543 |
| BXD07 | 0.718 | 2.576 |
| BXD08 | -0.214 | 0.0 |
| BXD09 | 0.285 | 1.495 |
| CAST | 0.859 | -0.566 |
| CCcont | -0.525 | -1.867 |
| DS01 | -0.38 | -0.972 |
| DS02 | 0.158 | -1.979 |
| DS04 | 1.093 | -2.764 |
| DS0c | 0.44 | -1.851 |
| GP01 | -0.347 | -1.407 |
| GP02 | -0.21 | -0.807 |
| GP0c | -0.457 | 1.482 |
| NOD | 0.0 | -2.32 |
| NZO | 1.849 | -0.204 |
| PWK | 0.274 | -0.953 |
| H37Rv_KO_CtpC | 0.0 | 0.753 |
| H37Rv_KO_CtpD | 1.135 | 3.509 |
| H37Rv_KO_Rv1272 | -0.495 | -1.128 |
| H37Rv_KO_SugABC | -0.348 | -1.51 |
| H37Rv_KO_MbtN | 0.821 | 3.036 |
| Trans05 | 0.265 | 0.385 |
| macrophage_unactivated | -0.436 | -1.916 |
| IL1 | -0.409 | -1.296 |
| Rapamycin | -0.424 | -2.75 |
| Tcell | 0.411 | -0.143 |
| GMCSF | -0.364 | -3.992 |
| IFNab | -0.417 | -2.473 |
| IFNg | -0.369 | 0.756 |
| IFNg_GMCSF1 | -0.434 | -1.106 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.559 |
| secA2_input | 0.302 | 3.788 |
| delta_Rv3594 | -0.119 | 0.512 |
| delta_Rv3717 | 0.424 | 1.86 |
| delta_Rv3811 | -1.377 | 0.876 |
| delta_Rv0954 | -1.196 | -1.93 |
| PonA1 | -1.069 | 0.771 |
| EccD1_KO | 0.414 | -1.365 |
| EspI_KO | -0.394 | 0.0 |
| PE35_KO | 0.0 | -0.922 |
| PPE68_KO | 0.0 | 1.286 |
| glycerol2 | -1.153 | -2.375 |
| lignocerate | -1.296 | -2.241 |
| oleate | -0.391 | -3.726 |
| phosphatidylcholine | -0.864 | -2.801 |
| acetate | -1.026 | -3.469 |
| glucAc | -1.1 | -1.902 |
| Rv0950ko | 0.416 | 0.567 |
| Rv1096ko | 1.463 | 2.18 |
| Rv3684ko | 1.241 | -1.546 |
| delta_otsA_trehalose | 0.133 | -0.035 |