Top 10 genes with highest correlation to Rv1308/atpA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3696c/glpK | (cc=0.5394) | info on Rv3696c/glpK |
| Rv0552/- | (cc=0.5078) | info on Rv0552/- |
| Rv2655c/- | (cc=0.4973) | info on Rv2655c/- |
| Rv0879c/- | (cc=0.4924) | info on Rv0879c/- |
| Rv2709/- | (cc=0.4799) | info on Rv2709/- |
| Rv2334/cysK1 | (cc=0.4791) | info on Rv2334/cysK1 |
| Rv1712/cmk | (cc=0.4749) | info on Rv1712/cmk |
| Rv0362/mgtE | (cc=0.441) | info on Rv0362/mgtE |
| Rv3248c/sahH | (cc=0.4369) | info on Rv3248c/sahH |
| Rv0270/fadD2 | (cc=0.4319) | info on Rv0270/fadD2 |
Correlation of Rv1308/atpA with Rv2709/-
Normalized LFCs for Rv1308/atpA:
(description and provenance of datasets)
| Rv1308/atpA | Rv2709/- | |
| Fe_supp_jason_reseq | 0.655 | 1.626 |
| low_pH_jason_reseq | 4.256 | 1.795 |
| NO_jason_reseq | 3.208 | 2.974 |
| B6_jason_reseq | 1.57 | 1.273 |
| MHCII_jason_reseq | -0.257 | 1.125 |
| Isoniazid02 | 0.0 | -1.237 |
| Rifampicin4 | 0.0 | 1.107 |
| Ethambutol3 | 0.168 | 1.628 |
| Meropenem3 | 0.0 | 0.49 |
| Vancomycin16 | 0.0 | 0.706 |
| Rv2680_day32 | 0.0 | 1.58 |
| H37Rv_KO_MarP | 1.782 | 1.424 |
| hypoxia_3wks | -0.961 | -1.687 |
| hypoxia_6wks | 0.0 | -0.121 |
| glycerol | 0.531 | 1.005 |
| cholesterol | -0.509 | 0.786 |
| AJ | -0.18 | -0.143 |
| Bibs02 | 1.031 | 0.578 |
| Bibs02c | 0.293 | 0.75 |
| BL6 | -0.439 | 0.238 |
| BL6a | -0.499 | 0.029 |
| BXD01 | 1.167 | -0.241 |
| BXD010 | -0.45 | -0.29 |
| BXD011 | 0.407 | 0.144 |
| BXD03 | -0.475 | -0.171 |
| BXD04 | -0.312 | -0.136 |
| BXD05 | 0.636 | 0.419 |
| BXD06 | 0.351 | -0.337 |
| BXD07 | 0.718 | 0.131 |
| BXD08 | -0.214 | -0.524 |
| BXD09 | 0.285 | 0.007 |
| CAST | 0.859 | 0.012 |
| CCcont | -0.525 | 0.087 |
| DS01 | -0.38 | 0.736 |
| DS02 | 0.158 | 1.33 |
| DS04 | 1.093 | 0.703 |
| DS0c | 0.44 | 0.493 |
| GP01 | -0.347 | 0.057 |
| GP02 | -0.21 | 0.152 |
| GP0c | -0.457 | 0.466 |
| NOD | 0.0 | 0.884 |
| NZO | 1.849 | 0.305 |
| PWK | 0.274 | -0.06 |
| H37Rv_KO_CtpC | 0.0 | 1.434 |
| H37Rv_KO_CtpD | 1.135 | 1.425 |
| H37Rv_KO_Rv1272 | -0.495 | 0.777 |
| H37Rv_KO_SugABC | -0.348 | 0.125 |
| H37Rv_KO_MbtN | 0.821 | -0.221 |
| Trans05 | 0.265 | 0.748 |
| macrophage_unactivated | -0.436 | -0.919 |
| IL1 | -0.409 | -0.282 |
| Rapamycin | -0.424 | -0.724 |
| Tcell | 0.411 | -0.43 |
| GMCSF | -0.364 | 0.119 |
| IFNab | -0.417 | -1.466 |
| IFNg | -0.369 | 0.12 |
| IFNg_GMCSF1 | -0.434 | -0.782 |
| Rv1432_day32 | 0.0 | -0.494 |
| Rv1565c_day32 | 0.0 | 0.096 |
| secA2_input | 0.302 | 0.091 |
| delta_Rv3594 | -0.119 | -1.081 |
| delta_Rv3717 | 0.424 | -0.736 |
| delta_Rv3811 | -1.377 | -1.392 |
| delta_Rv0954 | -1.196 | 0.145 |
| PonA1 | -1.069 | 0.204 |
| EccD1_KO | 0.414 | -0.309 |
| EspI_KO | -0.394 | 0.217 |
| PE35_KO | 0.0 | 0.204 |
| PPE68_KO | 0.0 | -0.147 |
| glycerol2 | -1.153 | -2.657 |
| lignocerate | -1.296 | -1.565 |
| oleate | -0.391 | -2.057 |
| phosphatidylcholine | -0.864 | -1.146 |
| acetate | -1.026 | 0.47 |
| glucAc | -1.1 | 0.381 |
| Rv0950ko | 0.416 | 0.241 |
| Rv1096ko | 1.463 | -1.65 |
| Rv3684ko | 1.241 | -0.553 |
| delta_otsA_trehalose | 0.133 | -0.908 |