Top 10 genes with highest correlation to Rv1283c/oppB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1281c/oppD | (cc=0.659) | info on Rv1281c/oppD |
| Rv2091c/- | (cc=0.5837) | info on Rv2091c/- |
| Rv1282c/oppC | (cc=0.5242) | info on Rv1282c/oppC |
| Rv2383c/mbtB | (cc=0.5047) | info on Rv2383c/mbtB |
| Rv1824/- | (cc=0.5018) | info on Rv1824/- |
| Rv2672/- | (cc=0.4991) | info on Rv2672/- |
| Rv2379c/mbtF | (cc=0.463) | info on Rv2379c/mbtF |
| Rv1280c/oppA | (cc=0.4542) | info on Rv1280c/oppA |
| Rv1274/lprB | (cc=0.452) | info on Rv1274/lprB |
| Rv0012/- | (cc=0.4515) | info on Rv0012/- |
Correlation of Rv1283c/oppB with Rv0012/-
Normalized LFCs for Rv1283c/oppB:
(description and provenance of datasets)
| Rv1283c/oppB | Rv0012/- | |
| Fe_supp_jason_reseq | 1.002 | 2.161 |
| low_pH_jason_reseq | 1.343 | 1.171 |
| NO_jason_reseq | 0.158 | 0.583 |
| B6_jason_reseq | 0.0 | 0.692 |
| MHCII_jason_reseq | -0.681 | 1.143 |
| Isoniazid02 | -0.113 | -1.404 |
| Rifampicin4 | -2.318 | -1.633 |
| Ethambutol3 | 0.045 | -1.597 |
| Meropenem3 | 0.044 | -0.944 |
| Vancomycin16 | -0.26 | -2.608 |
| Rv2680_day32 | 0.446 | -2.492 |
| H37Rv_KO_MarP | 1.393 | 6.0 |
| hypoxia_3wks | 0.08 | -0.57 |
| hypoxia_6wks | -1.685 | -1.52 |
| glycerol | 1.104 | 0.604 |
| cholesterol | -1.133 | -0.78 |
| AJ | -0.521 | -1.649 |
| Bibs02 | -0.411 | -0.183 |
| Bibs02c | -0.653 | -1.249 |
| BL6 | -1.241 | -2.486 |
| BL6a | -0.907 | -2.414 |
| BXD01 | -1.452 | -2.712 |
| BXD010 | -1.198 | -2.488 |
| BXD011 | -1.191 | -1.935 |
| BXD03 | -0.304 | -3.729 |
| BXD04 | -0.802 | -3.195 |
| BXD05 | -0.094 | -2.349 |
| BXD06 | -1.363 | -2.995 |
| BXD07 | -1.295 | -3.37 |
| BXD08 | -0.89 | -3.333 |
| BXD09 | -1.203 | -3.073 |
| CAST | -0.517 | -2.659 |
| CCcont | -0.938 | 0.069 |
| DS01 | 0.204 | -2.091 |
| DS02 | 0.69 | -1.925 |
| DS04 | -1.258 | -1.945 |
| DS0c | 0.52 | -0.702 |
| GP01 | -0.081 | -1.876 |
| GP02 | -1.478 | -2.085 |
| GP0c | -1.253 | -1.327 |
| NOD | 0.05 | -0.854 |
| NZO | -1.02 | -2.263 |
| PWK | -1.535 | -2.39 |
| H37Rv_KO_CtpC | -0.458 | -2.015 |
| H37Rv_KO_CtpD | 0.185 | 0.206 |
| H37Rv_KO_Rv1272 | -0.944 | -0.876 |
| H37Rv_KO_SugABC | 0.095 | -2.281 |
| H37Rv_KO_MbtN | 0.402 | -1.659 |
| Trans05 | -0.693 | -2.234 |
| macrophage_unactivated | -0.597 | -1.774 |
| IL1 | 0.074 | 0.394 |
| Rapamycin | 0.153 | -0.611 |
| Tcell | 0.163 | -0.313 |
| GMCSF | 0.259 | -1.307 |
| IFNab | -0.484 | -1.911 |
| IFNg | 0.385 | -1.323 |
| IFNg_GMCSF1 | 0.732 | -1.354 |
| Rv1432_day32 | 0.102 | -2.293 |
| Rv1565c_day32 | 0.235 | -0.186 |
| secA2_input | 0.614 | 2.074 |
| delta_Rv3594 | -0.471 | -0.084 |
| delta_Rv3717 | -0.477 | -1.37 |
| delta_Rv3811 | -0.828 | 0.242 |
| delta_Rv0954 | -1.441 | 0.26 |
| PonA1 | -0.355 | 0.74 |
| EccD1_KO | 0.658 | -2.815 |
| EspI_KO | 0.57 | -2.9 |
| PE35_KO | 0.738 | -0.073 |
| PPE68_KO | 0.467 | -1.587 |
| glycerol2 | -0.61 | -1.772 |
| lignocerate | -0.74 | -1.29 |
| oleate | -1.643 | -2.28 |
| phosphatidylcholine | 0.2 | -0.598 |
| acetate | 0.025 | 0.389 |
| glucAc | -0.804 | 0.07 |
| Rv0950ko | -0.072 | 0.832 |
| Rv1096ko | -0.072 | -3.049 |
| Rv3684ko | 0.583 | 0.141 |
| delta_otsA_trehalose | -0.042 | 1.33 |