Top 10 genes with highest correlation to Rv1280c/oppA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1282c/oppC | (cc=0.5445) | info on Rv1282c/oppC |
| Rv2091c/- | (cc=0.4643) | info on Rv2091c/- |
| Rv0418/lpqL | (cc=0.4607) | info on Rv0418/lpqL |
| Rv1705c/PPE22 | (cc=0.4549) | info on Rv1705c/PPE22 |
| Rv1283c/oppB | (cc=0.4542) | info on Rv1283c/oppB |
| Rv1274/lprB | (cc=0.4359) | info on Rv1274/lprB |
| Rv0361/- | (cc=0.4319) | info on Rv0361/- |
| Rv0981/mprA | (cc=0.4298) | info on Rv0981/mprA |
| Rv3265c/wbbL1 | (cc=0.4285) | info on Rv3265c/wbbL1 |
| Rv0408/pta | (cc=0.4181) | info on Rv0408/pta |
Correlation of Rv1280c/oppA with Rv1274/lprB
Normalized LFCs for Rv1280c/oppA:
(description and provenance of datasets)
| Rv1280c/oppA | Rv1274/lprB | |
| Fe_supp_jason_reseq | -0.425 | 1.339 |
| low_pH_jason_reseq | -0.862 | 0.0 |
| NO_jason_reseq | -0.441 | 0.362 |
| B6_jason_reseq | -0.594 | 0.0 |
| MHCII_jason_reseq | -0.869 | 1.234 |
| Isoniazid02 | 0.629 | -0.534 |
| Rifampicin4 | -2.171 | -2.328 |
| Ethambutol3 | -0.041 | 0.496 |
| Meropenem3 | 1.779 | 1.126 |
| Vancomycin16 | 0.146 | -1.632 |
| Rv2680_day32 | -1.155 | 0.249 |
| H37Rv_KO_MarP | 0.697 | 1.782 |
| hypoxia_3wks | -0.279 | 0.443 |
| hypoxia_6wks | -0.896 | -1.969 |
| glycerol | -0.101 | -2.411 |
| cholesterol | -0.374 | -2.343 |
| AJ | -0.039 | -1.171 |
| Bibs02 | -0.738 | -2.958 |
| Bibs02c | 0.033 | -0.523 |
| BL6 | -0.431 | -2.023 |
| BL6a | -0.333 | -3.204 |
| BXD01 | -0.746 | -1.555 |
| BXD010 | -0.252 | -2.072 |
| BXD011 | -0.355 | -1.711 |
| BXD03 | -0.546 | -2.187 |
| BXD04 | -0.545 | -1.877 |
| BXD05 | -0.405 | -1.921 |
| BXD06 | -0.765 | -2.159 |
| BXD07 | -0.431 | -2.24 |
| BXD08 | -0.743 | -2.151 |
| BXD09 | -0.825 | -2.133 |
| CAST | -0.821 | -3.495 |
| CCcont | -0.127 | -1.682 |
| DS01 | 0.24 | -2.82 |
| DS02 | 0.236 | -3.104 |
| DS04 | -1.084 | -2.769 |
| DS0c | -0.492 | -3.095 |
| GP01 | -0.147 | -1.597 |
| GP02 | 0.084 | -0.42 |
| GP0c | -0.763 | -1.645 |
| NOD | -0.579 | -3.409 |
| NZO | -0.829 | -0.556 |
| PWK | -1.454 | -2.977 |
| H37Rv_KO_CtpC | 0.177 | 0.652 |
| H37Rv_KO_CtpD | 1.046 | -2.049 |
| H37Rv_KO_Rv1272 | 1.206 | -2.281 |
| H37Rv_KO_SugABC | 0.987 | -1.053 |
| H37Rv_KO_MbtN | -0.367 | -1.161 |
| Trans05 | -1.368 | -1.865 |
| macrophage_unactivated | -0.947 | -1.31 |
| IL1 | 0.0 | -2.011 |
| Rapamycin | -0.322 | -2.081 |
| Tcell | -0.544 | -0.629 |
| GMCSF | -0.544 | -1.79 |
| IFNab | -0.583 | -2.05 |
| IFNg | -0.764 | -1.812 |
| IFNg_GMCSF1 | -0.217 | -1.7 |
| Rv1432_day32 | -1.469 | 0.0 |
| Rv1565c_day32 | -0.191 | -0.894 |
| secA2_input | -0.606 | -0.291 |
| delta_Rv3594 | -0.353 | -0.402 |
| delta_Rv3717 | -0.638 | -0.979 |
| delta_Rv3811 | -0.391 | -1.056 |
| delta_Rv0954 | -0.513 | -1.292 |
| PonA1 | 0.42 | -0.979 |
| EccD1_KO | 0.171 | 3.164 |
| EspI_KO | 0.479 | 2.396 |
| PE35_KO | 1.091 | 2.689 |
| PPE68_KO | 0.928 | 3.66 |
| glycerol2 | -1.138 | -1.016 |
| lignocerate | -0.95 | -1.835 |
| oleate | -2.234 | -2.912 |
| phosphatidylcholine | 0.714 | -0.31 |
| acetate | -0.467 | -0.951 |
| glucAc | -0.996 | -4.153 |
| Rv0950ko | 0.09 | 2.877 |
| Rv1096ko | 0.431 | 3.278 |
| Rv3684ko | 0.468 | 4.087 |
| delta_otsA_trehalose | -0.361 | 2.212 |