Top 10 genes with highest correlation to Rv1280c/oppA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1282c/oppC | (cc=0.5445) | info on Rv1282c/oppC |
| Rv2091c/- | (cc=0.4643) | info on Rv2091c/- |
| Rv0418/lpqL | (cc=0.4607) | info on Rv0418/lpqL |
| Rv1705c/PPE22 | (cc=0.4549) | info on Rv1705c/PPE22 |
| Rv1283c/oppB | (cc=0.4542) | info on Rv1283c/oppB |
| Rv1274/lprB | (cc=0.4359) | info on Rv1274/lprB |
| Rv0361/- | (cc=0.4319) | info on Rv0361/- |
| Rv0981/mprA | (cc=0.4298) | info on Rv0981/mprA |
| Rv3265c/wbbL1 | (cc=0.4285) | info on Rv3265c/wbbL1 |
| Rv0408/pta | (cc=0.4181) | info on Rv0408/pta |
Correlation of Rv1280c/oppA with Rv0418/lpqL
Normalized LFCs for Rv1280c/oppA:
(description and provenance of datasets)
| Rv1280c/oppA | Rv0418/lpqL | |
| Fe_supp_jason_reseq | -0.425 | -0.721 |
| low_pH_jason_reseq | -0.862 | -0.105 |
| NO_jason_reseq | -0.441 | -0.459 |
| B6_jason_reseq | -0.594 | -0.445 |
| MHCII_jason_reseq | -0.869 | 0.712 |
| Isoniazid02 | 0.629 | 0.981 |
| Rifampicin4 | -2.171 | 0.319 |
| Ethambutol3 | -0.041 | 0.866 |
| Meropenem3 | 1.779 | 3.701 |
| Vancomycin16 | 0.146 | 0.459 |
| Rv2680_day32 | -1.155 | -1.64 |
| H37Rv_KO_MarP | 0.697 | 1.348 |
| hypoxia_3wks | -0.279 | -0.183 |
| hypoxia_6wks | -0.896 | -0.685 |
| glycerol | -0.101 | 0.543 |
| cholesterol | -0.374 | 0.284 |
| AJ | -0.039 | -0.192 |
| Bibs02 | -0.738 | 1.069 |
| Bibs02c | 0.033 | -0.073 |
| BL6 | -0.431 | -0.216 |
| BL6a | -0.333 | -1.065 |
| BXD01 | -0.746 | -1.278 |
| BXD010 | -0.252 | -1.018 |
| BXD011 | -0.355 | -0.71 |
| BXD03 | -0.546 | -0.862 |
| BXD04 | -0.545 | -1.143 |
| BXD05 | -0.405 | -0.674 |
| BXD06 | -0.765 | -1.197 |
| BXD07 | -0.431 | -0.668 |
| BXD08 | -0.743 | -1.09 |
| BXD09 | -0.825 | -0.783 |
| CAST | -0.821 | -0.429 |
| CCcont | -0.127 | -0.361 |
| DS01 | 0.24 | 0.717 |
| DS02 | 0.236 | 0.97 |
| DS04 | -1.084 | -0.136 |
| DS0c | -0.492 | -0.493 |
| GP01 | -0.147 | -0.034 |
| GP02 | 0.084 | -1.034 |
| GP0c | -0.763 | -0.604 |
| NOD | -0.579 | 0.026 |
| NZO | -0.829 | -0.318 |
| PWK | -1.454 | -0.649 |
| H37Rv_KO_CtpC | 0.177 | -0.937 |
| H37Rv_KO_CtpD | 1.046 | 1.28 |
| H37Rv_KO_Rv1272 | 1.206 | 0.25 |
| H37Rv_KO_SugABC | 0.987 | 0.258 |
| H37Rv_KO_MbtN | -0.367 | -1.244 |
| Trans05 | -1.368 | -0.433 |
| macrophage_unactivated | -0.947 | 0.079 |
| IL1 | 0.0 | 0.148 |
| Rapamycin | -0.322 | 0.847 |
| Tcell | -0.544 | -0.342 |
| GMCSF | -0.544 | -0.576 |
| IFNab | -0.583 | 0.296 |
| IFNg | -0.764 | -0.139 |
| IFNg_GMCSF1 | -0.217 | 0.157 |
| Rv1432_day32 | -1.469 | -0.645 |
| Rv1565c_day32 | -0.191 | 0.567 |
| secA2_input | -0.606 | 0.16 |
| delta_Rv3594 | -0.353 | -1.94 |
| delta_Rv3717 | -0.638 | -1.487 |
| delta_Rv3811 | -0.391 | -1.975 |
| delta_Rv0954 | -0.513 | -0.505 |
| PonA1 | 0.42 | -0.993 |
| EccD1_KO | 0.171 | 0.25 |
| EspI_KO | 0.479 | 0.054 |
| PE35_KO | 1.091 | 0.222 |
| PPE68_KO | 0.928 | -0.458 |
| glycerol2 | -1.138 | 0.15 |
| lignocerate | -0.95 | -0.069 |
| oleate | -2.234 | -1.581 |
| phosphatidylcholine | 0.714 | -0.531 |
| acetate | -0.467 | 0.941 |
| glucAc | -0.996 | 0.378 |
| Rv0950ko | 0.09 | 0.238 |
| Rv1096ko | 0.431 | 0.573 |
| Rv3684ko | 0.468 | 0.383 |
| delta_otsA_trehalose | -0.361 | -0.081 |