Top 10 genes with highest correlation to Rv1237/sugB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1405c/- | (cc=0.6086) | info on Rv1405c/- |
| Rv3877/eccD1 | (cc=0.5945) | info on Rv3877/eccD1 |
| Rv3559c/- | (cc=0.5933) | info on Rv3559c/- |
| Rv1235/lpqY | (cc=0.5725) | info on Rv1235/lpqY |
| Rv1236/sugA | (cc=0.5601) | info on Rv1236/sugA |
| Rv3883c/mycP1 | (cc=0.5563) | info on Rv3883c/mycP1 |
| Rv3545c/cyp125 | (cc=0.556) | info on Rv3545c/cyp125 |
| Rv3615c/espC | (cc=0.5546) | info on Rv3615c/espC |
| Rv3882c/eccE1 | (cc=0.5538) | info on Rv3882c/eccE1 |
| Rv1793/esxN | (cc=0.5427) | info on Rv1793/esxN |
Correlation of Rv1237/sugB with Rv1405c/-
Normalized LFCs for Rv1237/sugB:
(description and provenance of datasets)
| Rv1237/sugB | Rv1405c/- | |
| Fe_supp_jason_reseq | -0.022 | 0.0 |
| low_pH_jason_reseq | -0.246 | -1.0 |
| NO_jason_reseq | 1.024 | 0.116 |
| B6_jason_reseq | -1.975 | -1.7 |
| MHCII_jason_reseq | -2.918 | -3.452 |
| Isoniazid02 | -2.085 | -0.09 |
| Rifampicin4 | -1.847 | -0.249 |
| Ethambutol3 | -1.927 | -0.154 |
| Meropenem3 | -1.899 | -0.404 |
| Vancomycin16 | -1.279 | 0.011 |
| Rv2680_day32 | -1.013 | -2.352 |
| H37Rv_KO_MarP | 1.024 | 0.388 |
| hypoxia_3wks | 0.933 | 0.199 |
| hypoxia_6wks | 0.058 | -0.14 |
| glycerol | 0.054 | -1.011 |
| cholesterol | 0.183 | -0.51 |
| AJ | -2.318 | -2.546 |
| Bibs02 | -0.927 | -2.874 |
| Bibs02c | -2.24 | -3.031 |
| BL6 | -0.94 | -0.849 |
| BL6a | -1.6 | -2.847 |
| BXD01 | -0.843 | -1.408 |
| BXD010 | -1.577 | -1.154 |
| BXD011 | -0.35 | -1.787 |
| BXD03 | -1.173 | -0.709 |
| BXD04 | 0.66 | -1.668 |
| BXD05 | -0.939 | -1.58 |
| BXD06 | -0.566 | -2.031 |
| BXD07 | -0.966 | -0.865 |
| BXD08 | -0.734 | -1.648 |
| BXD09 | -0.776 | -1.823 |
| CAST | -2.644 | -4.521 |
| CCcont | 1.438 | 0.164 |
| DS01 | -1.648 | -3.112 |
| DS02 | -1.517 | -2.247 |
| DS04 | -1.938 | -2.403 |
| DS0c | -2.869 | -3.556 |
| GP01 | -0.639 | -1.342 |
| GP02 | -1.183 | -1.544 |
| GP0c | -0.268 | 0.143 |
| NOD | -2.405 | -2.086 |
| NZO | -1.101 | -2.913 |
| PWK | -2.252 | -2.911 |
| H37Rv_KO_CtpC | 0.814 | -1.665 |
| H37Rv_KO_CtpD | -0.642 | -1.476 |
| H37Rv_KO_Rv1272 | 0.336 | -1.038 |
| H37Rv_KO_SugABC | -0.593 | -2.355 |
| H37Rv_KO_MbtN | 1.136 | -0.355 |
| Trans05 | 0.068 | -1.833 |
| macrophage_unactivated | 0.126 | 0.455 |
| IL1 | 0.771 | 0.498 |
| Rapamycin | 1.0 | 0.381 |
| Tcell | 0.733 | 0.785 |
| GMCSF | -0.277 | 0.304 |
| IFNab | -0.384 | 0.568 |
| IFNg | -0.585 | 1.074 |
| IFNg_GMCSF1 | 0.248 | -0.201 |
| Rv1432_day32 | -2.295 | -2.768 |
| Rv1565c_day32 | -1.579 | -3.668 |
| secA2_input | -1.404 | 0.41 |
| delta_Rv3594 | 0.061 | -1.065 |
| delta_Rv3717 | 0.385 | -0.643 |
| delta_Rv3811 | -0.321 | -1.124 |
| delta_Rv0954 | 0.026 | -0.119 |
| PonA1 | -2.052 | -0.542 |
| EccD1_KO | -1.924 | -0.273 |
| EspI_KO | -0.125 | -0.599 |
| PE35_KO | 0.423 | -0.347 |
| PPE68_KO | 1.059 | -0.88 |
| glycerol2 | 1.432 | 0.399 |
| lignocerate | 1.642 | 0.704 |
| oleate | -0.569 | 0.678 |
| phosphatidylcholine | 1.763 | 0.769 |
| acetate | 1.513 | -0.101 |
| glucAc | 1.822 | -0.128 |
| Rv0950ko | -1.499 | -0.069 |
| Rv1096ko | -0.262 | 0.235 |
| Rv3684ko | -1.077 | -0.226 |
| delta_otsA_trehalose | 0.0 | 0.088 |