Top 10 genes with highest correlation to Rv1218c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1517/- | (cc=0.5521) | info on Rv1517/- |
| Rv1914c/- | (cc=0.5513) | info on Rv1914c/- |
| Rv3125c/PPE49 | (cc=0.5377) | info on Rv3125c/PPE49 |
| Rv1526c/- | (cc=0.5171) | info on Rv1526c/- |
| Rv3831/- | (cc=0.5091) | info on Rv3831/- |
| Rv2452c/- | (cc=0.5061) | info on Rv2452c/- |
| Rv0844c/narL | (cc=0.4689) | info on Rv0844c/narL |
| Rv1891/- | (cc=0.4649) | info on Rv1891/- |
| Rv2818c/- | (cc=0.4618) | info on Rv2818c/- |
| Rv1548c/PPE21 | (cc=0.4556) | info on Rv1548c/PPE21 |
Correlation of Rv1218c/- with Rv3125c/PPE49
Normalized LFCs for Rv1218c/-:
(description and provenance of datasets)
| Rv1218c/- | Rv3125c/PPE49 | |
| Fe_supp_jason_reseq | 0.395 | 0.477 |
| low_pH_jason_reseq | -0.9 | -0.905 |
| NO_jason_reseq | -0.845 | -0.341 |
| B6_jason_reseq | -0.335 | -0.782 |
| MHCII_jason_reseq | -1.292 | -0.117 |
| Isoniazid02 | -0.144 | -1.523 |
| Rifampicin4 | 0.19 | 0.601 |
| Ethambutol3 | -0.12 | -0.043 |
| Meropenem3 | -0.631 | -0.69 |
| Vancomycin16 | -0.435 | -0.401 |
| Rv2680_day32 | 1.257 | 0.166 |
| H37Rv_KO_MarP | 0.995 | 0.416 |
| hypoxia_3wks | 0.044 | 0.156 |
| hypoxia_6wks | -1.1 | -0.301 |
| glycerol | -0.551 | -0.758 |
| cholesterol | 0.017 | -0.625 |
| AJ | 0.264 | -0.407 |
| Bibs02 | 0.086 | -0.477 |
| Bibs02c | -0.324 | -0.565 |
| BL6 | 0.115 | 0.71 |
| BL6a | 0.225 | 0.591 |
| BXD01 | 0.356 | 0.585 |
| BXD010 | 0.856 | 0.68 |
| BXD011 | 1.3 | 0.847 |
| BXD03 | 1.231 | 0.866 |
| BXD04 | 0.947 | 0.919 |
| BXD05 | 1.639 | 1.016 |
| BXD06 | 0.015 | 0.893 |
| BXD07 | 1.183 | 0.858 |
| BXD08 | 0.691 | 0.984 |
| BXD09 | 1.068 | 0.923 |
| CAST | 0.734 | -0.404 |
| CCcont | 0.394 | 0.879 |
| DS01 | 0.0 | -0.524 |
| DS02 | 0.384 | -0.102 |
| DS04 | -0.247 | -0.322 |
| DS0c | -0.768 | -0.137 |
| GP01 | 0.733 | -0.031 |
| GP02 | 1.787 | 0.54 |
| GP0c | 1.472 | -0.314 |
| NOD | -0.055 | -0.034 |
| NZO | -0.074 | -0.98 |
| PWK | -0.146 | -0.206 |
| H37Rv_KO_CtpC | 0.518 | 0.68 |
| H37Rv_KO_CtpD | 0.448 | 1.285 |
| H37Rv_KO_Rv1272 | 1.013 | 0.806 |
| H37Rv_KO_SugABC | 0.194 | 1.266 |
| H37Rv_KO_MbtN | -0.013 | 0.88 |
| Trans05 | 0.63 | 0.694 |
| macrophage_unactivated | 0.262 | -0.126 |
| IL1 | 0.673 | -0.208 |
| Rapamycin | 0.525 | -0.365 |
| Tcell | -0.326 | -0.326 |
| GMCSF | 0.742 | -0.137 |
| IFNab | 0.574 | -0.396 |
| IFNg | 1.216 | -0.045 |
| IFNg_GMCSF1 | 0.446 | 0.493 |
| Rv1432_day32 | 0.0 | -0.063 |
| Rv1565c_day32 | 0.057 | -0.232 |
| secA2_input | -0.407 | -0.567 |
| delta_Rv3594 | 1.331 | 0.347 |
| delta_Rv3717 | -0.413 | 0.193 |
| delta_Rv3811 | 1.437 | 0.454 |
| delta_Rv0954 | -0.183 | -0.619 |
| PonA1 | 0.511 | -0.02 |
| EccD1_KO | 1.131 | 0.355 |
| EspI_KO | 0.402 | 0.191 |
| PE35_KO | 0.875 | 0.292 |
| PPE68_KO | 0.96 | 0.054 |
| glycerol2 | -0.343 | -0.175 |
| lignocerate | 0.449 | -0.373 |
| oleate | -0.19 | -0.034 |
| phosphatidylcholine | 0.339 | -0.269 |
| acetate | -0.223 | -0.595 |
| glucAc | -0.281 | -0.52 |
| Rv0950ko | -0.184 | 0.35 |
| Rv1096ko | 0.507 | 0.06 |
| Rv3684ko | -0.301 | -0.157 |
| delta_otsA_trehalose | -0.324 | -1.215 |