Top 10 genes with highest correlation to Rv1218c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1517/- | (cc=0.5521) | info on Rv1517/- |
| Rv1914c/- | (cc=0.5513) | info on Rv1914c/- |
| Rv3125c/PPE49 | (cc=0.5377) | info on Rv3125c/PPE49 |
| Rv1526c/- | (cc=0.5171) | info on Rv1526c/- |
| Rv3831/- | (cc=0.5091) | info on Rv3831/- |
| Rv2452c/- | (cc=0.5061) | info on Rv2452c/- |
| Rv0844c/narL | (cc=0.4689) | info on Rv0844c/narL |
| Rv1891/- | (cc=0.4649) | info on Rv1891/- |
| Rv2818c/- | (cc=0.4618) | info on Rv2818c/- |
| Rv1548c/PPE21 | (cc=0.4556) | info on Rv1548c/PPE21 |
Correlation of Rv1218c/- with Rv2452c/-
Normalized LFCs for Rv1218c/-:
(description and provenance of datasets)
| Rv1218c/- | Rv2452c/- | |
| Fe_supp_jason_reseq | 0.395 | 0.96 |
| low_pH_jason_reseq | -0.9 | -0.964 |
| NO_jason_reseq | -0.845 | -1.313 |
| B6_jason_reseq | -0.335 | -0.583 |
| MHCII_jason_reseq | -1.292 | -0.223 |
| Isoniazid02 | -0.144 | -0.036 |
| Rifampicin4 | 0.19 | -1.719 |
| Ethambutol3 | -0.12 | 0.01 |
| Meropenem3 | -0.631 | -0.561 |
| Vancomycin16 | -0.435 | -0.738 |
| Rv2680_day32 | 1.257 | 0.925 |
| H37Rv_KO_MarP | 0.995 | -0.621 |
| hypoxia_3wks | 0.044 | 0.0 |
| hypoxia_6wks | -1.1 | -1.741 |
| glycerol | -0.551 | 0.0 |
| cholesterol | 0.017 | 0.879 |
| AJ | 0.264 | 0.336 |
| Bibs02 | 0.086 | -0.923 |
| Bibs02c | -0.324 | -0.841 |
| BL6 | 0.115 | 1.436 |
| BL6a | 0.225 | 1.722 |
| BXD01 | 0.356 | 0.958 |
| BXD010 | 0.856 | 0.495 |
| BXD011 | 1.3 | 1.58 |
| BXD03 | 1.231 | 1.511 |
| BXD04 | 0.947 | 1.075 |
| BXD05 | 1.639 | 1.515 |
| BXD06 | 0.015 | 0.742 |
| BXD07 | 1.183 | 1.6 |
| BXD08 | 0.691 | 1.268 |
| BXD09 | 1.068 | 1.494 |
| CAST | 0.734 | 0.1 |
| CCcont | 0.394 | 1.612 |
| DS01 | 0.0 | -0.277 |
| DS02 | 0.384 | -2.059 |
| DS04 | -0.247 | -0.485 |
| DS0c | -0.768 | -0.872 |
| GP01 | 0.733 | 1.026 |
| GP02 | 1.787 | 1.277 |
| GP0c | 1.472 | 1.216 |
| NOD | -0.055 | 2.039 |
| NZO | -0.074 | -1.582 |
| PWK | -0.146 | -1.294 |
| H37Rv_KO_CtpC | 0.518 | 1.687 |
| H37Rv_KO_CtpD | 0.448 | 0.874 |
| H37Rv_KO_Rv1272 | 1.013 | 1.052 |
| H37Rv_KO_SugABC | 0.194 | 0.637 |
| H37Rv_KO_MbtN | -0.013 | -0.071 |
| Trans05 | 0.63 | 1.058 |
| macrophage_unactivated | 0.262 | 0.126 |
| IL1 | 0.673 | -0.249 |
| Rapamycin | 0.525 | 0.776 |
| Tcell | -0.326 | -0.033 |
| GMCSF | 0.742 | 0.576 |
| IFNab | 0.574 | 0.181 |
| IFNg | 1.216 | -0.056 |
| IFNg_GMCSF1 | 0.446 | -0.368 |
| Rv1432_day32 | 0.0 | -0.894 |
| Rv1565c_day32 | 0.057 | 0.515 |
| secA2_input | -0.407 | -0.094 |
| delta_Rv3594 | 1.331 | -0.561 |
| delta_Rv3717 | -0.413 | -1.451 |
| delta_Rv3811 | 1.437 | -1.28 |
| delta_Rv0954 | -0.183 | -1.194 |
| PonA1 | 0.511 | -2.221 |
| EccD1_KO | 1.131 | 0.918 |
| EspI_KO | 0.402 | 1.098 |
| PE35_KO | 0.875 | 0.715 |
| PPE68_KO | 0.96 | 0.854 |
| glycerol2 | -0.343 | -0.158 |
| lignocerate | 0.449 | -0.312 |
| oleate | -0.19 | -1.089 |
| phosphatidylcholine | 0.339 | -0.048 |
| acetate | -0.223 | -0.494 |
| glucAc | -0.281 | -0.694 |
| Rv0950ko | -0.184 | -0.407 |
| Rv1096ko | 0.507 | -1.36 |
| Rv3684ko | -0.301 | 0.105 |
| delta_otsA_trehalose | -0.324 | -1.24 |