Top 10 genes with highest correlation to Rv1211/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1337/- | (cc=0.6764) | info on Rv1337/- |
| Rv0734/mapA | (cc=0.5786) | info on Rv0734/mapA |
| Rv3842c/glpQ1 | (cc=0.5746) | info on Rv3842c/glpQ1 |
| Rv0047c/- | (cc=0.5639) | info on Rv0047c/- |
| Rv1336/cysM | (cc=0.5605) | info on Rv1336/cysM |
| Rv3036c/TB22.2 | (cc=0.5486) | info on Rv3036c/TB22.2 |
| Rv1334/mec | (cc=0.5304) | info on Rv1334/mec |
| Rv2374c/hrcA | (cc=0.5087) | info on Rv2374c/hrcA |
| Rv0877/- | (cc=0.5051) | info on Rv0877/- |
| Rv1339/- | (cc=0.5037) | info on Rv1339/- |
Correlation of Rv1211/- with Rv1336/cysM
Normalized LFCs for Rv1211/-:
(description and provenance of datasets)
| Rv1211/- | Rv1336/cysM | |
| Fe_supp_jason_reseq | -1.763 | 0.199 |
| low_pH_jason_reseq | -0.171 | 0.831 |
| NO_jason_reseq | 2.134 | 1.113 |
| B6_jason_reseq | -4.091 | 0.705 |
| MHCII_jason_reseq | -3.219 | -0.079 |
| Isoniazid02 | -1.534 | 1.385 |
| Rifampicin4 | -0.799 | 0.076 |
| Ethambutol3 | 0.063 | -0.593 |
| Meropenem3 | 1.941 | 0.628 |
| Vancomycin16 | 0.138 | 0.666 |
| Rv2680_day32 | -0.305 | 0.675 |
| H37Rv_KO_MarP | -4.562 | -0.425 |
| hypoxia_3wks | -0.754 | 2.213 |
| hypoxia_6wks | 2.967 | 4.042 |
| glycerol | -1.249 | -0.967 |
| cholesterol | -1.945 | 0.048 |
| AJ | -2.328 | -1.56 |
| Bibs02 | -2.609 | -1.444 |
| Bibs02c | -2.498 | -1.203 |
| BL6 | -2.023 | 1.43 |
| BL6a | -1.571 | 1.05 |
| BXD01 | 0.741 | 2.221 |
| BXD010 | -0.845 | 1.974 |
| BXD011 | -0.895 | 3.102 |
| BXD03 | 0.886 | 1.156 |
| BXD04 | 1.799 | 1.994 |
| BXD05 | 2.449 | 1.724 |
| BXD06 | 1.419 | 2.328 |
| BXD07 | -0.802 | 2.6 |
| BXD08 | 0.167 | 2.71 |
| BXD09 | -0.237 | 1.771 |
| CAST | -1.72 | -0.594 |
| CCcont | 1.147 | 0.248 |
| DS01 | -2.989 | -1.632 |
| DS02 | -3.301 | -1.306 |
| DS04 | -0.044 | -0.136 |
| DS0c | -1.721 | -1.194 |
| GP01 | -0.397 | 1.134 |
| GP02 | -0.788 | 0.251 |
| GP0c | 1.94 | 1.595 |
| NOD | -1.782 | -1.128 |
| NZO | -1.156 | 0.23 |
| PWK | 0.466 | -0.469 |
| H37Rv_KO_CtpC | 1.982 | -0.578 |
| H37Rv_KO_CtpD | 0.8 | 0.006 |
| H37Rv_KO_Rv1272 | -1.785 | 1.298 |
| H37Rv_KO_SugABC | -0.74 | 0.836 |
| H37Rv_KO_MbtN | 2.823 | 2.209 |
| Trans05 | 0.857 | 1.733 |
| macrophage_unactivated | -6.0 | -2.061 |
| IL1 | -0.154 | -0.163 |
| Rapamycin | -1.449 | -0.915 |
| Tcell | 0.029 | 0.29 |
| GMCSF | -5.23 | -1.428 |
| IFNab | -0.789 | 0.115 |
| IFNg | 1.63 | -0.901 |
| IFNg_GMCSF1 | -0.289 | -1.024 |
| Rv1432_day32 | 0.0 | 0.846 |
| Rv1565c_day32 | -4.865 | -1.439 |
| secA2_input | -0.806 | 0.227 |
| delta_Rv3594 | 1.276 | 0.858 |
| delta_Rv3717 | 2.583 | 2.129 |
| delta_Rv3811 | 1.608 | 1.103 |
| delta_Rv0954 | -3.142 | -0.291 |
| PonA1 | -3.511 | -0.995 |
| EccD1_KO | -1.237 | 0.22 |
| EspI_KO | -0.396 | 0.088 |
| PE35_KO | -2.441 | -0.715 |
| PPE68_KO | -2.112 | 0.016 |
| glycerol2 | -0.722 | -0.206 |
| lignocerate | -0.392 | -2.133 |
| oleate | -0.73 | 2.606 |
| phosphatidylcholine | -1.401 | -1.732 |
| acetate | -1.662 | -0.073 |
| glucAc | -1.034 | -0.255 |
| Rv0950ko | -0.63 | -0.633 |
| Rv1096ko | 0.0 | -0.305 |
| Rv3684ko | -0.871 | 0.308 |
| delta_otsA_trehalose | -2.38 | -0.053 |