Top 10 genes with highest correlation to Rv1211/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1337/- | (cc=0.6764) | info on Rv1337/- |
| Rv0734/mapA | (cc=0.5786) | info on Rv0734/mapA |
| Rv3842c/glpQ1 | (cc=0.5746) | info on Rv3842c/glpQ1 |
| Rv0047c/- | (cc=0.5639) | info on Rv0047c/- |
| Rv1336/cysM | (cc=0.5605) | info on Rv1336/cysM |
| Rv3036c/TB22.2 | (cc=0.5486) | info on Rv3036c/TB22.2 |
| Rv1334/mec | (cc=0.5304) | info on Rv1334/mec |
| Rv2374c/hrcA | (cc=0.5087) | info on Rv2374c/hrcA |
| Rv0877/- | (cc=0.5051) | info on Rv0877/- |
| Rv1339/- | (cc=0.5037) | info on Rv1339/- |
Correlation of Rv1211/- with Rv1334/mec
Normalized LFCs for Rv1211/-:
(description and provenance of datasets)
| Rv1211/- | Rv1334/mec | |
| Fe_supp_jason_reseq | -1.763 | -1.481 |
| low_pH_jason_reseq | -0.171 | -0.197 |
| NO_jason_reseq | 2.134 | 1.011 |
| B6_jason_reseq | -4.091 | -0.525 |
| MHCII_jason_reseq | -3.219 | -0.587 |
| Isoniazid02 | -1.534 | 1.746 |
| Rifampicin4 | -0.799 | 0.127 |
| Ethambutol3 | 0.063 | 0.078 |
| Meropenem3 | 1.941 | 0.642 |
| Vancomycin16 | 0.138 | 1.117 |
| Rv2680_day32 | -0.305 | 0.825 |
| H37Rv_KO_MarP | -4.562 | 0.268 |
| hypoxia_3wks | -0.754 | 1.826 |
| hypoxia_6wks | 2.967 | 2.462 |
| glycerol | -1.249 | 0.057 |
| cholesterol | -1.945 | 0.261 |
| AJ | -2.328 | -0.324 |
| Bibs02 | -2.609 | -0.542 |
| Bibs02c | -2.498 | 0.597 |
| BL6 | -2.023 | 0.722 |
| BL6a | -1.571 | 1.194 |
| BXD01 | 0.741 | 1.351 |
| BXD010 | -0.845 | 1.985 |
| BXD011 | -0.895 | 2.172 |
| BXD03 | 0.886 | 0.748 |
| BXD04 | 1.799 | 1.201 |
| BXD05 | 2.449 | 1.843 |
| BXD06 | 1.419 | 1.645 |
| BXD07 | -0.802 | 1.663 |
| BXD08 | 0.167 | 1.376 |
| BXD09 | -0.237 | 1.363 |
| CAST | -1.72 | -0.813 |
| CCcont | 1.147 | -0.134 |
| DS01 | -2.989 | -0.987 |
| DS02 | -3.301 | -1.089 |
| DS04 | -0.044 | -0.523 |
| DS0c | -1.721 | -0.137 |
| GP01 | -0.397 | 0.192 |
| GP02 | -0.788 | 0.74 |
| GP0c | 1.94 | 1.04 |
| NOD | -1.782 | 0.151 |
| NZO | -1.156 | 0.325 |
| PWK | 0.466 | -0.176 |
| H37Rv_KO_CtpC | 1.982 | -0.648 |
| H37Rv_KO_CtpD | 0.8 | -0.362 |
| H37Rv_KO_Rv1272 | -1.785 | 0.7 |
| H37Rv_KO_SugABC | -0.74 | 1.725 |
| H37Rv_KO_MbtN | 2.823 | 1.499 |
| Trans05 | 0.857 | 0.873 |
| macrophage_unactivated | -6.0 | -2.108 |
| IL1 | -0.154 | 1.356 |
| Rapamycin | -1.449 | -0.384 |
| Tcell | 0.029 | -0.609 |
| GMCSF | -5.23 | -1.04 |
| IFNab | -0.789 | 0.46 |
| IFNg | 1.63 | 0.182 |
| IFNg_GMCSF1 | -0.289 | 0.053 |
| Rv1432_day32 | 0.0 | 0.245 |
| Rv1565c_day32 | -4.865 | -0.828 |
| secA2_input | -0.806 | 0.204 |
| delta_Rv3594 | 1.276 | 0.704 |
| delta_Rv3717 | 2.583 | 2.015 |
| delta_Rv3811 | 1.608 | 1.691 |
| delta_Rv0954 | -3.142 | -0.207 |
| PonA1 | -3.511 | -0.103 |
| EccD1_KO | -1.237 | -0.957 |
| EspI_KO | -0.396 | -1.001 |
| PE35_KO | -2.441 | -1.149 |
| PPE68_KO | -2.112 | -1.085 |
| glycerol2 | -0.722 | -0.82 |
| lignocerate | -0.392 | -2.169 |
| oleate | -0.73 | 1.965 |
| phosphatidylcholine | -1.401 | -1.476 |
| acetate | -1.662 | -0.755 |
| glucAc | -1.034 | -0.862 |
| Rv0950ko | -0.63 | -0.473 |
| Rv1096ko | 0.0 | 0.03 |
| Rv3684ko | -0.871 | 0.321 |
| delta_otsA_trehalose | -2.38 | 0.117 |