Top 10 genes with highest correlation to Rv1211/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1337/- | (cc=0.6764) | info on Rv1337/- |
| Rv0734/mapA | (cc=0.5786) | info on Rv0734/mapA |
| Rv3842c/glpQ1 | (cc=0.5746) | info on Rv3842c/glpQ1 |
| Rv0047c/- | (cc=0.5639) | info on Rv0047c/- |
| Rv1336/cysM | (cc=0.5605) | info on Rv1336/cysM |
| Rv3036c/TB22.2 | (cc=0.5486) | info on Rv3036c/TB22.2 |
| Rv1334/mec | (cc=0.5304) | info on Rv1334/mec |
| Rv2374c/hrcA | (cc=0.5087) | info on Rv2374c/hrcA |
| Rv0877/- | (cc=0.5051) | info on Rv0877/- |
| Rv1339/- | (cc=0.5037) | info on Rv1339/- |
Correlation of Rv1211/- with Rv1337/-
Normalized LFCs for Rv1211/-:
(description and provenance of datasets)
| Rv1211/- | Rv1337/- | |
| Fe_supp_jason_reseq | -1.763 | -0.161 |
| low_pH_jason_reseq | -0.171 | 0.703 |
| NO_jason_reseq | 2.134 | 2.318 |
| B6_jason_reseq | -4.091 | -1.801 |
| MHCII_jason_reseq | -3.219 | -2.508 |
| Isoniazid02 | -1.534 | -0.07 |
| Rifampicin4 | -0.799 | 0.406 |
| Ethambutol3 | 0.063 | -0.5 |
| Meropenem3 | 1.941 | 1.32 |
| Vancomycin16 | 0.138 | 1.043 |
| Rv2680_day32 | -0.305 | -1.037 |
| H37Rv_KO_MarP | -4.562 | -2.441 |
| hypoxia_3wks | -0.754 | 1.392 |
| hypoxia_6wks | 2.967 | 2.915 |
| glycerol | -1.249 | 0.415 |
| cholesterol | -1.945 | 0.0 |
| AJ | -2.328 | -2.513 |
| Bibs02 | -2.609 | -2.162 |
| Bibs02c | -2.498 | -2.367 |
| BL6 | -2.023 | 0.701 |
| BL6a | -1.571 | 0.578 |
| BXD01 | 0.741 | 1.969 |
| BXD010 | -0.845 | 2.132 |
| BXD011 | -0.895 | 3.388 |
| BXD03 | 0.886 | 0.939 |
| BXD04 | 1.799 | 1.697 |
| BXD05 | 2.449 | 1.871 |
| BXD06 | 1.419 | 1.658 |
| BXD07 | -0.802 | 1.934 |
| BXD08 | 0.167 | 1.855 |
| BXD09 | -0.237 | 1.712 |
| CAST | -1.72 | -3.187 |
| CCcont | 1.147 | 1.179 |
| DS01 | -2.989 | -3.343 |
| DS02 | -3.301 | -2.811 |
| DS04 | -0.044 | -0.457 |
| DS0c | -1.721 | -2.564 |
| GP01 | -0.397 | 0.863 |
| GP02 | -0.788 | 1.125 |
| GP0c | 1.94 | 2.274 |
| NOD | -1.782 | -1.744 |
| NZO | -1.156 | -1.048 |
| PWK | 0.466 | -1.421 |
| H37Rv_KO_CtpC | 1.982 | -0.128 |
| H37Rv_KO_CtpD | 0.8 | 0.747 |
| H37Rv_KO_Rv1272 | -1.785 | 1.141 |
| H37Rv_KO_SugABC | -0.74 | 2.529 |
| H37Rv_KO_MbtN | 2.823 | 2.805 |
| Trans05 | 0.857 | 1.849 |
| macrophage_unactivated | -6.0 | -1.395 |
| IL1 | -0.154 | 1.344 |
| Rapamycin | -1.449 | 0.153 |
| Tcell | 0.029 | -0.384 |
| GMCSF | -5.23 | -1.286 |
| IFNab | -0.789 | 0.62 |
| IFNg | 1.63 | 1.229 |
| IFNg_GMCSF1 | -0.289 | -0.547 |
| Rv1432_day32 | 0.0 | 1.108 |
| Rv1565c_day32 | -4.865 | -1.428 |
| secA2_input | -0.806 | -0.216 |
| delta_Rv3594 | 1.276 | 1.64 |
| delta_Rv3717 | 2.583 | 3.154 |
| delta_Rv3811 | 1.608 | 1.901 |
| delta_Rv0954 | -3.142 | 0.093 |
| PonA1 | -3.511 | -0.688 |
| EccD1_KO | -1.237 | -1.618 |
| EspI_KO | -0.396 | -0.625 |
| PE35_KO | -2.441 | -1.607 |
| PPE68_KO | -2.112 | -1.299 |
| glycerol2 | -0.722 | 0.105 |
| lignocerate | -0.392 | -2.007 |
| oleate | -0.73 | 2.057 |
| phosphatidylcholine | -1.401 | -2.241 |
| acetate | -1.662 | 0.1 |
| glucAc | -1.034 | -0.357 |
| Rv0950ko | -0.63 | -0.615 |
| Rv1096ko | 0.0 | -0.09 |
| Rv3684ko | -0.871 | 0.16 |
| delta_otsA_trehalose | -2.38 | 0.625 |