Top 10 genes with highest correlation to Rv1204c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1205/- | (cc=0.4958) | info on Rv1205/- |
| Rv0539/- | (cc=0.4727) | info on Rv0539/- |
| Rv2426c/- | (cc=0.4346) | info on Rv2426c/- |
| Rv1071c/echA9 | (cc=0.4318) | info on Rv1071c/echA9 |
| Rv1206/fadD6 | (cc=0.4205) | info on Rv1206/fadD6 |
| Rv3463/- | (cc=0.4158) | info on Rv3463/- |
| Rv1151c/- | (cc=0.3926) | info on Rv1151c/- |
| Rv0393/- | (cc=0.3923) | info on Rv0393/- |
| Rv2550c/vapB20 | (cc=0.3916) | info on Rv2550c/vapB20 |
| Rv2656c/- | (cc=0.391) | info on Rv2656c/- |
Correlation of Rv1204c/- with Rv1071c/echA9
Normalized LFCs for Rv1204c/-:
(description and provenance of datasets)
| Rv1204c/- | Rv1071c/echA9 | |
| Fe_supp_jason_reseq | -0.838 | -2.134 |
| low_pH_jason_reseq | 0.438 | -6.0 |
| NO_jason_reseq | 0.299 | -0.714 |
| B6_jason_reseq | 0.67 | -1.643 |
| MHCII_jason_reseq | -0.108 | -0.403 |
| Isoniazid02 | -0.231 | -0.38 |
| Rifampicin4 | 0.092 | 1.625 |
| Ethambutol3 | 2.259 | 2.909 |
| Meropenem3 | -0.092 | -0.565 |
| Vancomycin16 | -0.204 | 0.65 |
| Rv2680_day32 | -0.836 | -1.463 |
| H37Rv_KO_MarP | -0.179 | 0.131 |
| hypoxia_3wks | -0.77 | -2.245 |
| hypoxia_6wks | 0.355 | -1.779 |
| glycerol | 0.105 | -0.341 |
| cholesterol | 0.025 | -1.471 |
| AJ | 0.225 | -1.143 |
| Bibs02 | -1.424 | -0.359 |
| Bibs02c | 0.427 | -0.361 |
| BL6 | 0.626 | -0.587 |
| BL6a | 0.103 | -1.323 |
| BXD01 | 0.38 | -1.426 |
| BXD010 | 0.155 | -1.162 |
| BXD011 | 0.017 | -1.515 |
| BXD03 | 0.593 | -0.581 |
| BXD04 | 0.909 | -0.728 |
| BXD05 | -0.086 | -1.541 |
| BXD06 | 0.113 | -1.418 |
| BXD07 | 0.134 | -1.218 |
| BXD08 | 0.625 | -1.412 |
| BXD09 | -0.063 | -1.427 |
| CAST | 1.405 | -0.267 |
| CCcont | -0.182 | -0.661 |
| DS01 | 0.76 | 0.95 |
| DS02 | 0.211 | 1.531 |
| DS04 | 0.878 | 0.034 |
| DS0c | 0.13 | 0.484 |
| GP01 | -1.315 | -1.89 |
| GP02 | -0.203 | -2.563 |
| GP0c | -0.158 | -2.376 |
| NOD | -0.05 | -0.093 |
| NZO | -0.204 | -0.936 |
| PWK | 0.922 | -0.365 |
| H37Rv_KO_CtpC | 0.921 | 0.685 |
| H37Rv_KO_CtpD | 0.537 | -1.157 |
| H37Rv_KO_Rv1272 | 0.154 | -1.269 |
| H37Rv_KO_SugABC | 0.302 | -0.94 |
| H37Rv_KO_MbtN | -0.116 | -1.364 |
| Trans05 | 0.458 | -1.065 |
| macrophage_unactivated | -0.679 | -1.231 |
| IL1 | -0.344 | -1.658 |
| Rapamycin | -0.396 | -1.547 |
| Tcell | 0.169 | -0.674 |
| GMCSF | 0.016 | -0.771 |
| IFNab | 0.018 | -1.69 |
| IFNg | -0.556 | -2.996 |
| IFNg_GMCSF1 | -0.075 | -2.718 |
| Rv1432_day32 | -0.395 | -1.287 |
| Rv1565c_day32 | -0.686 | -0.403 |
| secA2_input | 0.6 | 0.167 |
| delta_Rv3594 | 0.207 | 0.653 |
| delta_Rv3717 | 0.52 | -0.289 |
| delta_Rv3811 | -0.396 | 0.296 |
| delta_Rv0954 | 0.93 | 0.845 |
| PonA1 | 0.394 | 0.205 |
| EccD1_KO | 1.414 | 0.398 |
| EspI_KO | -0.177 | 0.73 |
| PE35_KO | 0.198 | 0.181 |
| PPE68_KO | -0.141 | -0.138 |
| glycerol2 | 0.687 | 0.738 |
| lignocerate | 1.101 | 0.588 |
| oleate | 0.712 | 1.09 |
| phosphatidylcholine | 1.373 | 0.714 |
| acetate | 0.746 | 0.032 |
| glucAc | 0.247 | -0.28 |
| Rv0950ko | 0.353 | -0.449 |
| Rv1096ko | 0.443 | 0.582 |
| Rv3684ko | -0.75 | -0.829 |
| delta_otsA_trehalose | -0.159 | -0.355 |