Top 10 genes with highest correlation to Rv1197/esxK:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2347c/esxP | (cc=0.4015) | info on Rv2347c/esxP |
| Rv2349c/plcC | (cc=0.3906) | info on Rv2349c/plcC |
| Rv0247c/- | (cc=0.3893) | info on Rv0247c/- |
| Rv1162/narH | (cc=0.3716) | info on Rv1162/narH |
| Rv0374c/- | (cc=0.3689) | info on Rv0374c/- |
| Rv3684/- | (cc=0.3689) | info on Rv3684/- |
| Rv2827c/- | (cc=0.3679) | info on Rv2827c/- |
| Rv2592c/ruvB | (cc=0.3678) | info on Rv2592c/ruvB |
| Rv1790/PPE27 | (cc=0.3579) | info on Rv1790/PPE27 |
| Rv3312A/- | (cc=0.3536) | info on Rv3312A/- |
Correlation of Rv1197/esxK with Rv3312A/-
Normalized LFCs for Rv1197/esxK:
(description and provenance of datasets)
| Rv1197/esxK | Rv3312A/- | |
| Fe_supp_jason_reseq | 0.464 | -0.35 |
| low_pH_jason_reseq | -2.52 | -0.132 |
| NO_jason_reseq | -0.247 | 0.893 |
| B6_jason_reseq | -0.31 | 1.266 |
| MHCII_jason_reseq | -0.558 | 0.295 |
| Isoniazid02 | -0.892 | 0.941 |
| Rifampicin4 | -0.387 | 0.742 |
| Ethambutol3 | -0.04 | 0.548 |
| Meropenem3 | 1.653 | 2.13 |
| Vancomycin16 | -1.441 | 0.727 |
| Rv2680_day32 | -1.276 | -0.959 |
| H37Rv_KO_MarP | -0.33 | 0.344 |
| hypoxia_3wks | 0.064 | -0.231 |
| hypoxia_6wks | -1.363 | -0.395 |
| glycerol | -0.165 | 0.726 |
| cholesterol | -1.91 | 0.382 |
| AJ | 0.225 | 0.225 |
| Bibs02 | -0.984 | -1.288 |
| Bibs02c | -1.614 | -0.975 |
| BL6 | -0.838 | -0.038 |
| BL6a | -1.052 | -0.436 |
| BXD01 | -0.908 | 0.434 |
| BXD010 | -1.175 | -0.436 |
| BXD011 | 0.006 | -0.098 |
| BXD03 | -0.551 | 0.181 |
| BXD04 | -0.666 | -0.474 |
| BXD05 | -0.975 | 0.265 |
| BXD06 | -0.317 | 0.331 |
| BXD07 | -0.455 | 0.75 |
| BXD08 | -0.524 | -0.034 |
| BXD09 | -0.144 | 0.066 |
| CAST | -0.224 | -0.017 |
| CCcont | 0.114 | 0.157 |
| DS01 | -2.012 | -0.27 |
| DS02 | -1.516 | 0.274 |
| DS04 | -1.318 | 0.022 |
| DS0c | -0.74 | 0.064 |
| GP01 | -1.166 | 0.31 |
| GP02 | -0.791 | 1.1 |
| GP0c | -0.837 | 0.597 |
| NOD | 0.633 | 0.382 |
| NZO | -0.72 | -0.377 |
| PWK | -0.411 | -0.328 |
| H37Rv_KO_CtpC | -1.66 | -0.717 |
| H37Rv_KO_CtpD | -0.066 | 0.144 |
| H37Rv_KO_Rv1272 | -1.665 | -0.912 |
| H37Rv_KO_SugABC | -1.626 | -0.312 |
| H37Rv_KO_MbtN | -1.646 | 0.777 |
| Trans05 | -1.155 | -0.372 |
| macrophage_unactivated | -0.404 | 0.133 |
| IL1 | -1.112 | 0.113 |
| Rapamycin | -0.445 | 0.292 |
| Tcell | 0.384 | 0.336 |
| GMCSF | 1.65 | -0.034 |
| IFNab | -1.382 | -0.804 |
| IFNg | -1.029 | 0.551 |
| IFNg_GMCSF1 | -1.533 | -0.478 |
| Rv1432_day32 | -1.725 | 0.48 |
| Rv1565c_day32 | -1.756 | -3.838 |
| secA2_input | 0.992 | 0.243 |
| delta_Rv3594 | -0.457 | 1.41 |
| delta_Rv3717 | -0.902 | 1.221 |
| delta_Rv3811 | -0.523 | 0.55 |
| delta_Rv0954 | 0.177 | 1.469 |
| PonA1 | 0.193 | 1.13 |
| EccD1_KO | -0.076 | -0.747 |
| EspI_KO | -0.134 | -0.374 |
| PE35_KO | -0.327 | -0.875 |
| PPE68_KO | -0.413 | -0.771 |
| glycerol2 | -0.535 | 1.241 |
| lignocerate | -0.798 | 1.444 |
| oleate | -0.061 | 0.771 |
| phosphatidylcholine | -0.092 | 1.408 |
| acetate | -0.736 | 0.48 |
| glucAc | -0.106 | 0.764 |
| Rv0950ko | -0.253 | 0.519 |
| Rv1096ko | -0.992 | 0.452 |
| Rv3684ko | -2.325 | 0.252 |
| delta_otsA_trehalose | -2.743 | -0.354 |