Top 10 genes with highest correlation to Rv1197/esxK:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2347c/esxP | (cc=0.4015) | info on Rv2347c/esxP |
| Rv2349c/plcC | (cc=0.3906) | info on Rv2349c/plcC |
| Rv0247c/- | (cc=0.3893) | info on Rv0247c/- |
| Rv1162/narH | (cc=0.3716) | info on Rv1162/narH |
| Rv0374c/- | (cc=0.3689) | info on Rv0374c/- |
| Rv3684/- | (cc=0.3689) | info on Rv3684/- |
| Rv2827c/- | (cc=0.3679) | info on Rv2827c/- |
| Rv2592c/ruvB | (cc=0.3678) | info on Rv2592c/ruvB |
| Rv1790/PPE27 | (cc=0.3579) | info on Rv1790/PPE27 |
| Rv3312A/- | (cc=0.3536) | info on Rv3312A/- |
Correlation of Rv1197/esxK with Rv0247c/-
Normalized LFCs for Rv1197/esxK:
(description and provenance of datasets)
| Rv1197/esxK | Rv0247c/- | |
| Fe_supp_jason_reseq | 0.464 | 1.983 |
| low_pH_jason_reseq | -2.52 | -1.419 |
| NO_jason_reseq | -0.247 | -1.231 |
| B6_jason_reseq | -0.31 | -0.941 |
| MHCII_jason_reseq | -0.558 | -0.572 |
| Isoniazid02 | -0.892 | 1.883 |
| Rifampicin4 | -0.387 | 0.69 |
| Ethambutol3 | -0.04 | 0.804 |
| Meropenem3 | 1.653 | 2.189 |
| Vancomycin16 | -1.441 | 0.353 |
| Rv2680_day32 | -1.276 | -2.632 |
| H37Rv_KO_MarP | -0.33 | 0.0 |
| hypoxia_3wks | 0.064 | -1.36 |
| hypoxia_6wks | -1.363 | -1.934 |
| glycerol | -0.165 | -2.017 |
| cholesterol | -1.91 | 0.057 |
| AJ | 0.225 | -2.318 |
| Bibs02 | -0.984 | -1.827 |
| Bibs02c | -1.614 | -2.09 |
| BL6 | -0.838 | -1.125 |
| BL6a | -1.052 | -1.435 |
| BXD01 | -0.908 | -1.052 |
| BXD010 | -1.175 | 0.674 |
| BXD011 | 0.006 | -0.824 |
| BXD03 | -0.551 | 0.42 |
| BXD04 | -0.666 | -0.549 |
| BXD05 | -0.975 | -1.21 |
| BXD06 | -0.317 | -0.768 |
| BXD07 | -0.455 | -0.702 |
| BXD08 | -0.524 | -0.674 |
| BXD09 | -0.144 | -1.135 |
| CAST | -0.224 | -1.023 |
| CCcont | 0.114 | 2.237 |
| DS01 | -2.012 | -1.359 |
| DS02 | -1.516 | -0.714 |
| DS04 | -1.318 | -0.533 |
| DS0c | -0.74 | -1.403 |
| GP01 | -1.166 | -0.986 |
| GP02 | -0.791 | -0.831 |
| GP0c | -0.837 | -1.299 |
| NOD | 0.633 | 1.534 |
| NZO | -0.72 | 0.228 |
| PWK | -0.411 | -1.584 |
| H37Rv_KO_CtpC | -1.66 | 1.332 |
| H37Rv_KO_CtpD | -0.066 | -0.283 |
| H37Rv_KO_Rv1272 | -1.665 | -0.387 |
| H37Rv_KO_SugABC | -1.626 | -0.083 |
| H37Rv_KO_MbtN | -1.646 | -0.396 |
| Trans05 | -1.155 | -1.175 |
| macrophage_unactivated | -0.404 | 0.896 |
| IL1 | -1.112 | -1.05 |
| Rapamycin | -0.445 | -0.62 |
| Tcell | 0.384 | 0.753 |
| GMCSF | 1.65 | -1.151 |
| IFNab | -1.382 | -1.07 |
| IFNg | -1.029 | -1.165 |
| IFNg_GMCSF1 | -1.533 | -0.412 |
| Rv1432_day32 | -1.725 | -3.206 |
| Rv1565c_day32 | -1.756 | -0.415 |
| secA2_input | 0.992 | 0.282 |
| delta_Rv3594 | -0.457 | -0.788 |
| delta_Rv3717 | -0.902 | -1.664 |
| delta_Rv3811 | -0.523 | -0.391 |
| delta_Rv0954 | 0.177 | 1.441 |
| PonA1 | 0.193 | 1.182 |
| EccD1_KO | -0.076 | 0.697 |
| EspI_KO | -0.134 | 2.23 |
| PE35_KO | -0.327 | 1.683 |
| PPE68_KO | -0.413 | 1.789 |
| glycerol2 | -0.535 | 1.941 |
| lignocerate | -0.798 | -0.32 |
| oleate | -0.061 | 1.418 |
| phosphatidylcholine | -0.092 | -0.508 |
| acetate | -0.736 | -0.78 |
| glucAc | -0.106 | 0.3 |
| Rv0950ko | -0.253 | 0.314 |
| Rv1096ko | -0.992 | 0.063 |
| Rv3684ko | -2.325 | -0.072 |
| delta_otsA_trehalose | -2.743 | -1.786 |