Top 10 genes with highest correlation to Rv1191/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0273c/- | (cc=0.5107) | info on Rv0273c/- |
| Rv2591/PE_PGRS44 | (cc=0.4738) | info on Rv2591/PE_PGRS44 |
| Rv3344c/PE_PGRS49 | (cc=0.4713) | info on Rv3344c/PE_PGRS49 |
| Rv2487c/PE_PGRS42 | (cc=0.4664) | info on Rv2487c/PE_PGRS42 |
| Rv2850c/- | (cc=0.4455) | info on Rv2850c/- |
| Rv3338/- | (cc=0.4412) | info on Rv3338/- |
| Rv3539/PPE63 | (cc=0.4401) | info on Rv3539/PPE63 |
| Rv2769c/PE27 | (cc=0.4373) | info on Rv2769c/PE27 |
| Rv1546/- | (cc=0.436) | info on Rv1546/- |
| Rv1985c/- | (cc=0.4336) | info on Rv1985c/- |
Correlation of Rv1191/- with Rv3338/-
Normalized LFCs for Rv1191/-:
(description and provenance of datasets)
| Rv1191/- | Rv3338/- | |
| Fe_supp_jason_reseq | -1.689 | -0.766 |
| low_pH_jason_reseq | -1.544 | -1.106 |
| NO_jason_reseq | -0.546 | -1.735 |
| B6_jason_reseq | -1.175 | -0.352 |
| MHCII_jason_reseq | 0.137 | -1.465 |
| Isoniazid02 | -0.333 | 0.336 |
| Rifampicin4 | 0.455 | -0.246 |
| Ethambutol3 | 0.049 | 0.17 |
| Meropenem3 | 3.004 | -0.036 |
| Vancomycin16 | -0.037 | -0.326 |
| Rv2680_day32 | 0.224 | -2.697 |
| H37Rv_KO_MarP | 0.096 | 0.337 |
| hypoxia_3wks | 0.195 | 1.013 |
| hypoxia_6wks | -0.487 | 0.453 |
| glycerol | 1.063 | -0.347 |
| cholesterol | 0.683 | -0.209 |
| AJ | -0.385 | 0.309 |
| Bibs02 | -0.123 | -0.167 |
| Bibs02c | -0.362 | -1.296 |
| BL6 | 0.314 | 1.162 |
| BL6a | -0.343 | -0.016 |
| BXD01 | 0.772 | 1.324 |
| BXD010 | 0.418 | 0.01 |
| BXD011 | 0.183 | 0.281 |
| BXD03 | -0.342 | 1.874 |
| BXD04 | 0.366 | -0.308 |
| BXD05 | -0.134 | -1.283 |
| BXD06 | -0.398 | -0.698 |
| BXD07 | -0.403 | 0.126 |
| BXD08 | 1.069 | 1.481 |
| BXD09 | -0.409 | -0.547 |
| CAST | -0.43 | 0.432 |
| CCcont | -0.971 | -1.154 |
| DS01 | -1.129 | -1.531 |
| DS02 | -1.252 | -3.017 |
| DS04 | -0.193 | 1.117 |
| DS0c | -1.017 | -0.793 |
| GP01 | -0.018 | 0.118 |
| GP02 | 1.19 | 2.55 |
| GP0c | -0.473 | 0.295 |
| NOD | -1.316 | -0.675 |
| NZO | -0.048 | 1.036 |
| PWK | 0.321 | 0.135 |
| H37Rv_KO_CtpC | -0.498 | -0.613 |
| H37Rv_KO_CtpD | -0.629 | -0.785 |
| H37Rv_KO_Rv1272 | 0.732 | -0.999 |
| H37Rv_KO_SugABC | -0.098 | -2.062 |
| H37Rv_KO_MbtN | 0.435 | 1.059 |
| Trans05 | 1.466 | 1.581 |
| macrophage_unactivated | -0.379 | -0.253 |
| IL1 | -1.204 | -1.219 |
| Rapamycin | 0.028 | -2.007 |
| Tcell | -0.088 | -0.147 |
| GMCSF | -0.951 | -0.341 |
| IFNab | -1.336 | -1.333 |
| IFNg | -0.903 | -1.139 |
| IFNg_GMCSF1 | -0.99 | -1.153 |
| Rv1432_day32 | -0.034 | 0.18 |
| Rv1565c_day32 | -0.472 | -0.218 |
| secA2_input | -0.883 | -1.583 |
| delta_Rv3594 | -0.541 | 2.1 |
| delta_Rv3717 | -0.209 | 1.258 |
| delta_Rv3811 | -0.39 | 0.439 |
| delta_Rv0954 | 0.382 | 1.018 |
| PonA1 | 0.172 | 0.65 |
| EccD1_KO | -0.46 | -0.109 |
| EspI_KO | -1.041 | -0.14 |
| PE35_KO | -0.986 | -0.61 |
| PPE68_KO | -1.344 | 0.051 |
| glycerol2 | 0.321 | -0.273 |
| lignocerate | -0.423 | -1.501 |
| oleate | 0.784 | 1.161 |
| phosphatidylcholine | 0.374 | -0.615 |
| acetate | -0.545 | -2.529 |
| glucAc | -1.392 | -2.186 |
| Rv0950ko | 0.027 | 0.522 |
| Rv1096ko | 0.609 | 0.564 |
| Rv3684ko | 0.832 | 0.386 |
| delta_otsA_trehalose | -0.704 | 0.4 |