Top 10 genes with highest correlation to Rv1191/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0273c/- | (cc=0.5107) | info on Rv0273c/- |
| Rv2591/PE_PGRS44 | (cc=0.4738) | info on Rv2591/PE_PGRS44 |
| Rv3344c/PE_PGRS49 | (cc=0.4713) | info on Rv3344c/PE_PGRS49 |
| Rv2487c/PE_PGRS42 | (cc=0.4664) | info on Rv2487c/PE_PGRS42 |
| Rv2850c/- | (cc=0.4455) | info on Rv2850c/- |
| Rv3338/- | (cc=0.4412) | info on Rv3338/- |
| Rv3539/PPE63 | (cc=0.4401) | info on Rv3539/PPE63 |
| Rv2769c/PE27 | (cc=0.4373) | info on Rv2769c/PE27 |
| Rv1546/- | (cc=0.436) | info on Rv1546/- |
| Rv1985c/- | (cc=0.4336) | info on Rv1985c/- |
Correlation of Rv1191/- with Rv2487c/PE_PGRS42
Normalized LFCs for Rv1191/-:
(description and provenance of datasets)
| Rv1191/- | Rv2487c/PE_PGRS42 | |
| Fe_supp_jason_reseq | -1.689 | -0.774 |
| low_pH_jason_reseq | -1.544 | -0.763 |
| NO_jason_reseq | -0.546 | 0.0 |
| B6_jason_reseq | -1.175 | 0.405 |
| MHCII_jason_reseq | 0.137 | 1.334 |
| Isoniazid02 | -0.333 | 0.732 |
| Rifampicin4 | 0.455 | 1.362 |
| Ethambutol3 | 0.049 | 1.166 |
| Meropenem3 | 3.004 | 2.673 |
| Vancomycin16 | -0.037 | 0.854 |
| Rv2680_day32 | 0.224 | 0.373 |
| H37Rv_KO_MarP | 0.096 | -0.059 |
| hypoxia_3wks | 0.195 | -0.319 |
| hypoxia_6wks | -0.487 | -1.566 |
| glycerol | 1.063 | 0.791 |
| cholesterol | 0.683 | 0.381 |
| AJ | -0.385 | 1.6 |
| Bibs02 | -0.123 | 0.121 |
| Bibs02c | -0.362 | 0.412 |
| BL6 | 0.314 | 0.05 |
| BL6a | -0.343 | -0.082 |
| BXD01 | 0.772 | 0.035 |
| BXD010 | 0.418 | -0.749 |
| BXD011 | 0.183 | -0.377 |
| BXD03 | -0.342 | -0.998 |
| BXD04 | 0.366 | -0.366 |
| BXD05 | -0.134 | 0.0 |
| BXD06 | -0.398 | -0.78 |
| BXD07 | -0.403 | -0.361 |
| BXD08 | 1.069 | -0.6 |
| BXD09 | -0.409 | -0.694 |
| CAST | -0.43 | 0.349 |
| CCcont | -0.971 | -0.289 |
| DS01 | -1.129 | 0.156 |
| DS02 | -1.252 | -0.06 |
| DS04 | -0.193 | 0.866 |
| DS0c | -1.017 | 0.17 |
| GP01 | -0.018 | -0.509 |
| GP02 | 1.19 | 0.55 |
| GP0c | -0.473 | -0.054 |
| NOD | -1.316 | 1.518 |
| NZO | -0.048 | 0.724 |
| PWK | 0.321 | 0.129 |
| H37Rv_KO_CtpC | -0.498 | 0.065 |
| H37Rv_KO_CtpD | -0.629 | -0.802 |
| H37Rv_KO_Rv1272 | 0.732 | 0.772 |
| H37Rv_KO_SugABC | -0.098 | 0.697 |
| H37Rv_KO_MbtN | 0.435 | 0.441 |
| Trans05 | 1.466 | 1.066 |
| macrophage_unactivated | -0.379 | -1.054 |
| IL1 | -1.204 | -0.81 |
| Rapamycin | 0.028 | -0.077 |
| Tcell | -0.088 | -0.515 |
| GMCSF | -0.951 | -0.642 |
| IFNab | -1.336 | -1.732 |
| IFNg | -0.903 | -1.433 |
| IFNg_GMCSF1 | -0.99 | -0.764 |
| Rv1432_day32 | -0.034 | 0.299 |
| Rv1565c_day32 | -0.472 | -0.55 |
| secA2_input | -0.883 | -0.318 |
| delta_Rv3594 | -0.541 | -0.35 |
| delta_Rv3717 | -0.209 | 0.205 |
| delta_Rv3811 | -0.39 | -0.409 |
| delta_Rv0954 | 0.382 | 0.074 |
| PonA1 | 0.172 | -0.888 |
| EccD1_KO | -0.46 | 0.266 |
| EspI_KO | -1.041 | 0.174 |
| PE35_KO | -0.986 | -0.449 |
| PPE68_KO | -1.344 | -0.723 |
| glycerol2 | 0.321 | -0.287 |
| lignocerate | -0.423 | 0.041 |
| oleate | 0.784 | -0.469 |
| phosphatidylcholine | 0.374 | 0.252 |
| acetate | -0.545 | 0.248 |
| glucAc | -1.392 | 0.635 |
| Rv0950ko | 0.027 | 0.953 |
| Rv1096ko | 0.609 | 1.393 |
| Rv3684ko | 0.832 | 1.107 |
| delta_otsA_trehalose | -0.704 | 0.329 |