Top 10 genes with highest correlation to Rv1129c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1130/prpD | (cc=0.7283) | info on Rv1130/prpD |
| Rv3553/- | (cc=0.6209) | info on Rv3553/- |
| Rv3570c/hsaA | (cc=0.5518) | info on Rv3570c/hsaA |
| Rv3545c/cyp125 | (cc=0.5246) | info on Rv3545c/cyp125 |
| Rv1404/- | (cc=0.5084) | info on Rv1404/- |
| Rv3615c/espC | (cc=0.5058) | info on Rv3615c/espC |
| Rv0163/- | (cc=0.4979) | info on Rv0163/- |
| Rv1628c/- | (cc=0.4876) | info on Rv1628c/- |
| Rv3571/kshB | (cc=0.4839) | info on Rv3571/kshB |
| Rv3544c/fadE28 | (cc=0.4824) | info on Rv3544c/fadE28 |
Correlation of Rv1129c/- with Rv3615c/espC
Normalized LFCs for Rv1129c/-:
(description and provenance of datasets)
| Rv1129c/- | Rv3615c/espC | |
| Fe_supp_jason_reseq | -0.485 | -0.076 |
| low_pH_jason_reseq | -2.491 | -0.791 |
| NO_jason_reseq | -0.499 | -0.179 |
| B6_jason_reseq | -0.574 | -2.738 |
| MHCII_jason_reseq | -0.478 | -3.219 |
| Isoniazid02 | 0.76 | -1.534 |
| Rifampicin4 | -0.206 | 0.663 |
| Ethambutol3 | 1.282 | 0.61 |
| Meropenem3 | 0.961 | -0.927 |
| Vancomycin16 | 0.098 | -0.438 |
| Rv2680_day32 | -0.382 | -2.287 |
| H37Rv_KO_MarP | 0.309 | 0.763 |
| hypoxia_3wks | -0.53 | -0.642 |
| hypoxia_6wks | 0.777 | -0.453 |
| glycerol | -0.65 | -1.542 |
| cholesterol | -3.06 | -2.127 |
| AJ | -1.378 | -4.615 |
| Bibs02 | -3.031 | -6.0 |
| Bibs02c | -2.084 | -5.515 |
| BL6 | 0.636 | -1.925 |
| BL6a | -0.604 | -4.038 |
| BXD01 | -0.175 | -2.432 |
| BXD010 | -0.172 | -1.317 |
| BXD011 | 0.657 | -2.379 |
| BXD03 | 0.033 | -2.734 |
| BXD04 | 0.075 | -1.094 |
| BXD05 | 0.248 | -2.385 |
| BXD06 | 0.098 | -3.264 |
| BXD07 | 0.068 | -2.435 |
| BXD08 | -0.198 | -3.429 |
| BXD09 | -0.149 | -3.21 |
| CAST | -1.819 | -4.656 |
| CCcont | 0.018 | 0.08 |
| DS01 | -1.928 | -5.297 |
| DS02 | -1.837 | -6.0 |
| DS04 | -0.727 | -3.797 |
| DS0c | -1.439 | -6.0 |
| GP01 | -1.577 | -1.918 |
| GP02 | -1.548 | -2.771 |
| GP0c | -0.958 | -0.687 |
| NOD | 0.028 | -0.556 |
| NZO | -1.056 | -4.599 |
| PWK | -1.348 | -5.419 |
| H37Rv_KO_CtpC | 0.04 | -1.589 |
| H37Rv_KO_CtpD | 0.15 | -0.43 |
| H37Rv_KO_Rv1272 | -0.149 | -1.432 |
| H37Rv_KO_SugABC | -1.284 | -1.494 |
| H37Rv_KO_MbtN | 0.313 | 0.721 |
| Trans05 | -0.805 | -1.485 |
| macrophage_unactivated | -0.767 | -1.203 |
| IL1 | 0.074 | -0.303 |
| Rapamycin | -1.224 | -0.761 |
| Tcell | -2.115 | -2.278 |
| GMCSF | -0.272 | 0.887 |
| IFNab | 0.221 | 0.629 |
| IFNg | -0.572 | -1.924 |
| IFNg_GMCSF1 | 0.229 | -1.304 |
| Rv1432_day32 | -0.562 | -2.181 |
| Rv1565c_day32 | -0.535 | -3.023 |
| secA2_input | -0.637 | 0.844 |
| delta_Rv3594 | 0.895 | 0.45 |
| delta_Rv3717 | 0.818 | -0.276 |
| delta_Rv3811 | 0.608 | -0.611 |
| delta_Rv0954 | -0.24 | 0.062 |
| PonA1 | -0.386 | -1.032 |
| EccD1_KO | 0.22 | -0.247 |
| EspI_KO | -0.411 | -0.639 |
| PE35_KO | 0.563 | -0.096 |
| PPE68_KO | -0.224 | -0.403 |
| glycerol2 | -1.058 | 0.556 |
| lignocerate | -0.648 | 0.544 |
| oleate | -1.07 | -0.103 |
| phosphatidylcholine | -0.895 | -0.066 |
| acetate | -0.03 | -0.146 |
| glucAc | 0.124 | -0.122 |
| Rv0950ko | 0.338 | -0.256 |
| Rv1096ko | 0.947 | -1.122 |
| Rv3684ko | 0.544 | -0.668 |
| delta_otsA_trehalose | -1.23 | 1.448 |