Top 10 genes with highest correlation to Rv1129c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1130/prpD | (cc=0.7283) | info on Rv1130/prpD |
| Rv3553/- | (cc=0.6209) | info on Rv3553/- |
| Rv3570c/hsaA | (cc=0.5518) | info on Rv3570c/hsaA |
| Rv3545c/cyp125 | (cc=0.5246) | info on Rv3545c/cyp125 |
| Rv1404/- | (cc=0.5084) | info on Rv1404/- |
| Rv3615c/espC | (cc=0.5058) | info on Rv3615c/espC |
| Rv0163/- | (cc=0.4979) | info on Rv0163/- |
| Rv1628c/- | (cc=0.4876) | info on Rv1628c/- |
| Rv3571/kshB | (cc=0.4839) | info on Rv3571/kshB |
| Rv3544c/fadE28 | (cc=0.4824) | info on Rv3544c/fadE28 |
Correlation of Rv1129c/- with Rv3553/-
Normalized LFCs for Rv1129c/-:
(description and provenance of datasets)
| Rv1129c/- | Rv3553/- | |
| Fe_supp_jason_reseq | -0.485 | -0.346 |
| low_pH_jason_reseq | -2.491 | -0.798 |
| NO_jason_reseq | -0.499 | -1.685 |
| B6_jason_reseq | -0.574 | -2.718 |
| MHCII_jason_reseq | -0.478 | -2.764 |
| Isoniazid02 | 0.76 | 0.141 |
| Rifampicin4 | -0.206 | 0.054 |
| Ethambutol3 | 1.282 | -0.113 |
| Meropenem3 | 0.961 | 1.961 |
| Vancomycin16 | 0.098 | 0.08 |
| Rv2680_day32 | -0.382 | -0.074 |
| H37Rv_KO_MarP | 0.309 | 0.487 |
| hypoxia_3wks | -0.53 | -0.845 |
| hypoxia_6wks | 0.777 | 0.311 |
| glycerol | -0.65 | -0.36 |
| cholesterol | -3.06 | -3.515 |
| AJ | -1.378 | -2.393 |
| Bibs02 | -3.031 | -4.437 |
| Bibs02c | -2.084 | -3.674 |
| BL6 | 0.636 | -1.398 |
| BL6a | -0.604 | -2.752 |
| BXD01 | -0.175 | -1.241 |
| BXD010 | -0.172 | -1.394 |
| BXD011 | 0.657 | -0.52 |
| BXD03 | 0.033 | 0.554 |
| BXD04 | 0.075 | -1.209 |
| BXD05 | 0.248 | -0.145 |
| BXD06 | 0.098 | -1.453 |
| BXD07 | 0.068 | -0.464 |
| BXD08 | -0.198 | -0.937 |
| BXD09 | -0.149 | -1.953 |
| CAST | -1.819 | -3.482 |
| CCcont | 0.018 | 0.355 |
| DS01 | -1.928 | -3.472 |
| DS02 | -1.837 | -4.682 |
| DS04 | -0.727 | -3.407 |
| DS0c | -1.439 | -5.264 |
| GP01 | -1.577 | -0.565 |
| GP02 | -1.548 | -1.861 |
| GP0c | -0.958 | 0.139 |
| NOD | 0.028 | -2.511 |
| NZO | -1.056 | 0.1 |
| PWK | -1.348 | -1.77 |
| H37Rv_KO_CtpC | 0.04 | -3.144 |
| H37Rv_KO_CtpD | 0.15 | -1.494 |
| H37Rv_KO_Rv1272 | -0.149 | -0.089 |
| H37Rv_KO_SugABC | -1.284 | -0.01 |
| H37Rv_KO_MbtN | 0.313 | -0.159 |
| Trans05 | -0.805 | 0.536 |
| macrophage_unactivated | -0.767 | 0.0 |
| IL1 | 0.074 | 0.317 |
| Rapamycin | -1.224 | 0.485 |
| Tcell | -2.115 | -2.225 |
| GMCSF | -0.272 | 0.694 |
| IFNab | 0.221 | 1.246 |
| IFNg | -0.572 | 0.203 |
| IFNg_GMCSF1 | 0.229 | 0.17 |
| Rv1432_day32 | -0.562 | -0.926 |
| Rv1565c_day32 | -0.535 | -1.589 |
| secA2_input | -0.637 | -0.471 |
| delta_Rv3594 | 0.895 | 0.318 |
| delta_Rv3717 | 0.818 | 0.539 |
| delta_Rv3811 | 0.608 | 1.096 |
| delta_Rv0954 | -0.24 | 0.451 |
| PonA1 | -0.386 | -0.04 |
| EccD1_KO | 0.22 | 0.214 |
| EspI_KO | -0.411 | -0.57 |
| PE35_KO | 0.563 | 0.0 |
| PPE68_KO | -0.224 | -0.262 |
| glycerol2 | -1.058 | -0.238 |
| lignocerate | -0.648 | 0.817 |
| oleate | -1.07 | -2.912 |
| phosphatidylcholine | -0.895 | -0.038 |
| acetate | -0.03 | 0.517 |
| glucAc | 0.124 | 0.827 |
| Rv0950ko | 0.338 | 0.525 |
| Rv1096ko | 0.947 | 1.629 |
| Rv3684ko | 0.544 | 2.024 |
| delta_otsA_trehalose | -1.23 | -0.603 |