Top 10 genes with highest correlation to Rv1129c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1130/prpD | (cc=0.7283) | info on Rv1130/prpD |
| Rv3553/- | (cc=0.6209) | info on Rv3553/- |
| Rv3570c/hsaA | (cc=0.5518) | info on Rv3570c/hsaA |
| Rv3545c/cyp125 | (cc=0.5246) | info on Rv3545c/cyp125 |
| Rv1404/- | (cc=0.5084) | info on Rv1404/- |
| Rv3615c/espC | (cc=0.5058) | info on Rv3615c/espC |
| Rv0163/- | (cc=0.4979) | info on Rv0163/- |
| Rv1628c/- | (cc=0.4876) | info on Rv1628c/- |
| Rv3571/kshB | (cc=0.4839) | info on Rv3571/kshB |
| Rv3544c/fadE28 | (cc=0.4824) | info on Rv3544c/fadE28 |
Correlation of Rv1129c/- with Rv1130/prpD
Normalized LFCs for Rv1129c/-:
(description and provenance of datasets)
| Rv1129c/- | Rv1130/prpD | |
| Fe_supp_jason_reseq | -0.485 | -0.554 |
| low_pH_jason_reseq | -2.491 | -2.367 |
| NO_jason_reseq | -0.499 | 0.042 |
| B6_jason_reseq | -0.574 | -2.148 |
| MHCII_jason_reseq | -0.478 | -1.471 |
| Isoniazid02 | 0.76 | 0.147 |
| Rifampicin4 | -0.206 | -0.219 |
| Ethambutol3 | 1.282 | 0.181 |
| Meropenem3 | 0.961 | 0.732 |
| Vancomycin16 | 0.098 | 0.138 |
| Rv2680_day32 | -0.382 | -1.446 |
| H37Rv_KO_MarP | 0.309 | -0.302 |
| hypoxia_3wks | -0.53 | -0.686 |
| hypoxia_6wks | 0.777 | 0.259 |
| glycerol | -0.65 | -0.671 |
| cholesterol | -3.06 | -3.292 |
| AJ | -1.378 | -1.852 |
| Bibs02 | -3.031 | -3.513 |
| Bibs02c | -2.084 | -3.471 |
| BL6 | 0.636 | 0.876 |
| BL6a | -0.604 | -1.171 |
| BXD01 | -0.175 | 0.075 |
| BXD010 | -0.172 | 0.237 |
| BXD011 | 0.657 | 0.272 |
| BXD03 | 0.033 | -0.17 |
| BXD04 | 0.075 | -0.06 |
| BXD05 | 0.248 | -0.207 |
| BXD06 | 0.098 | 0.106 |
| BXD07 | 0.068 | 0.2 |
| BXD08 | -0.198 | 0.646 |
| BXD09 | -0.149 | -0.051 |
| CAST | -1.819 | -1.562 |
| CCcont | 0.018 | 0.873 |
| DS01 | -1.928 | -3.537 |
| DS02 | -1.837 | -3.608 |
| DS04 | -0.727 | -1.452 |
| DS0c | -1.439 | -2.596 |
| GP01 | -1.577 | -1.529 |
| GP02 | -1.548 | -0.583 |
| GP0c | -0.958 | -0.096 |
| NOD | 0.028 | -0.054 |
| NZO | -1.056 | -1.982 |
| PWK | -1.348 | -2.011 |
| H37Rv_KO_CtpC | 0.04 | -0.798 |
| H37Rv_KO_CtpD | 0.15 | -0.381 |
| H37Rv_KO_Rv1272 | -0.149 | 0.62 |
| H37Rv_KO_SugABC | -1.284 | -0.024 |
| H37Rv_KO_MbtN | 0.313 | -0.413 |
| Trans05 | -0.805 | 0.241 |
| macrophage_unactivated | -0.767 | -0.997 |
| IL1 | 0.074 | -3.625 |
| Rapamycin | -1.224 | -3.228 |
| Tcell | -2.115 | -2.209 |
| GMCSF | -0.272 | 0.739 |
| IFNab | 0.221 | 1.608 |
| IFNg | -0.572 | -0.139 |
| IFNg_GMCSF1 | 0.229 | 1.012 |
| Rv1432_day32 | -0.562 | -0.19 |
| Rv1565c_day32 | -0.535 | -0.261 |
| secA2_input | -0.637 | -1.005 |
| delta_Rv3594 | 0.895 | 0.347 |
| delta_Rv3717 | 0.818 | 0.428 |
| delta_Rv3811 | 0.608 | 0.47 |
| delta_Rv0954 | -0.24 | 0.884 |
| PonA1 | -0.386 | 0.152 |
| EccD1_KO | 0.22 | 1.145 |
| EspI_KO | -0.411 | 0.359 |
| PE35_KO | 0.563 | 0.971 |
| PPE68_KO | -0.224 | 0.921 |
| glycerol2 | -1.058 | -0.363 |
| lignocerate | -0.648 | -0.514 |
| oleate | -1.07 | -1.27 |
| phosphatidylcholine | -0.895 | -0.717 |
| acetate | -0.03 | 1.232 |
| glucAc | 0.124 | 1.099 |
| Rv0950ko | 0.338 | 0.476 |
| Rv1096ko | 0.947 | 0.265 |
| Rv3684ko | 0.544 | -0.203 |
| delta_otsA_trehalose | -1.23 | 0.846 |