Top 10 genes with highest correlation to Rv1084/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1274/lprB | (cc=0.5195) | info on Rv1274/lprB |
| Rv3265c/wbbL1 | (cc=0.5161) | info on Rv3265c/wbbL1 |
| Rv0203/- | (cc=0.5105) | info on Rv0203/- |
| Rv0841/- | (cc=0.5101) | info on Rv0841/- |
| Rv0006/gyrA | (cc=0.5026) | info on Rv0006/gyrA |
| Rv0449c/- | (cc=0.4947) | info on Rv0449c/- |
| Rv0381c/- | (cc=0.4818) | info on Rv0381c/- |
| Rv3586/- | (cc=0.4807) | info on Rv3586/- |
| Rv3557c/- | (cc=0.4739) | info on Rv3557c/- |
| Rv3037c/- | (cc=0.4656) | info on Rv3037c/- |
Correlation of Rv1084/- with Rv3265c/wbbL1
Normalized LFCs for Rv1084/-:
(description and provenance of datasets)
| Rv1084/- | Rv3265c/wbbL1 | |
| Fe_supp_jason_reseq | -0.578 | 0.182 |
| low_pH_jason_reseq | 0.0 | -0.44 |
| NO_jason_reseq | 0.74 | -0.331 |
| B6_jason_reseq | 0.412 | -0.292 |
| MHCII_jason_reseq | 0.255 | -0.257 |
| Isoniazid02 | -0.409 | 0.0 |
| Rifampicin4 | 0.122 | 0.374 |
| Ethambutol3 | 0.129 | 0.32 |
| Meropenem3 | 0.913 | 0.315 |
| Vancomycin16 | 0.048 | 0.366 |
| Rv2680_day32 | -1.272 | -0.131 |
| H37Rv_KO_MarP | 0.711 | 0.141 |
| hypoxia_3wks | -0.207 | 0.0 |
| hypoxia_6wks | -0.276 | 0.263 |
| glycerol | 0.269 | 0.265 |
| cholesterol | -1.305 | 0.0 |
| AJ | -0.708 | -0.983 |
| Bibs02 | 0.575 | 0.898 |
| Bibs02c | -0.658 | -0.677 |
| BL6 | -0.717 | -0.53 |
| BL6a | -0.641 | -0.462 |
| BXD01 | -0.926 | -0.422 |
| BXD010 | -0.426 | -0.543 |
| BXD011 | -0.776 | -0.412 |
| BXD03 | -1.155 | -0.315 |
| BXD04 | -0.83 | -0.524 |
| BXD05 | -0.694 | -0.57 |
| BXD06 | -0.829 | -0.566 |
| BXD07 | -0.809 | -0.587 |
| BXD08 | -1.265 | -0.564 |
| BXD09 | -1.117 | -0.596 |
| CAST | -1.163 | -0.537 |
| CCcont | -0.442 | -0.633 |
| DS01 | -0.515 | -0.765 |
| DS02 | -0.35 | 0.285 |
| DS04 | 0.35 | -0.822 |
| DS0c | 0.014 | -0.919 |
| GP01 | 0.184 | 0.485 |
| GP02 | -0.011 | -0.194 |
| GP0c | -0.273 | 0.391 |
| NOD | -0.472 | -0.524 |
| NZO | -0.74 | -0.845 |
| PWK | -1.056 | -0.831 |
| H37Rv_KO_CtpC | -0.651 | 0.213 |
| H37Rv_KO_CtpD | 0.154 | 1.425 |
| H37Rv_KO_Rv1272 | -0.495 | 0.811 |
| H37Rv_KO_SugABC | -0.831 | -0.42 |
| H37Rv_KO_MbtN | -0.509 | -0.437 |
| Trans05 | -1.096 | -0.305 |
| macrophage_unactivated | -0.514 | -0.83 |
| IL1 | -0.133 | -0.78 |
| Rapamycin | -0.353 | -0.807 |
| Tcell | -0.863 | -0.857 |
| GMCSF | 0.143 | -0.694 |
| IFNab | -0.529 | -0.795 |
| IFNg | 0.257 | -0.703 |
| IFNg_GMCSF1 | -0.962 | -0.826 |
| Rv1432_day32 | 0.463 | -0.231 |
| Rv1565c_day32 | -0.498 | 0.0 |
| secA2_input | 0.108 | 0.18 |
| delta_Rv3594 | 0.038 | -0.635 |
| delta_Rv3717 | 0.121 | 0.254 |
| delta_Rv3811 | -0.076 | -1.487 |
| delta_Rv0954 | -0.494 | -0.802 |
| PonA1 | 0.111 | -0.372 |
| EccD1_KO | 0.987 | 1.654 |
| EspI_KO | 0.2 | 0.633 |
| PE35_KO | 0.169 | 0.939 |
| PPE68_KO | -0.154 | 1.03 |
| glycerol2 | -0.573 | -0.758 |
| lignocerate | -0.849 | -0.826 |
| oleate | -1.099 | -0.425 |
| phosphatidylcholine | -0.661 | -0.758 |
| acetate | -0.482 | -1.127 |
| glucAc | -0.219 | -0.701 |
| Rv0950ko | 0.639 | 0.347 |
| Rv1096ko | 0.914 | 1.999 |
| Rv3684ko | 0.305 | 0.727 |
| delta_otsA_trehalose | 0.721 | 0.111 |