Top 10 genes with highest correlation to Rv1082/mca:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3165c/- | (cc=0.4085) | info on Rv3165c/- |
| Rv1083/- | (cc=0.4038) | info on Rv1083/- |
| Rv2427c/proA | (cc=0.3975) | info on Rv2427c/proA |
| Rv1404/- | (cc=0.3864) | info on Rv1404/- |
| Rv3855/ethR | (cc=0.3736) | info on Rv3855/ethR |
| Rv2335/cysE | (cc=0.3678) | info on Rv2335/cysE |
| Rv0499/- | (cc=0.3634) | info on Rv0499/- |
| Rv0626/vapB5 | (cc=0.3574) | info on Rv0626/vapB5 |
| Rv3214/gpm2 | (cc=0.3495) | info on Rv3214/gpm2 |
| Rv3438/- | (cc=0.3384) | info on Rv3438/- |
Correlation of Rv1082/mca with Rv3855/ethR
Normalized LFCs for Rv1082/mca:
(description and provenance of datasets)
| Rv1082/mca | Rv3855/ethR | |
| Fe_supp_jason_reseq | 1.88 | 1.219 |
| low_pH_jason_reseq | 1.504 | 2.111 |
| NO_jason_reseq | -1.638 | -6.0 |
| B6_jason_reseq | 0.914 | 0.077 |
| MHCII_jason_reseq | 0.26 | -0.624 |
| Isoniazid02 | -0.976 | -0.982 |
| Rifampicin4 | 0.179 | -0.13 |
| Ethambutol3 | 0.632 | 0.316 |
| Meropenem3 | -0.229 | -0.058 |
| Vancomycin16 | -0.44 | 0.324 |
| Rv2680_day32 | -0.148 | -0.235 |
| H37Rv_KO_MarP | 1.043 | 0.937 |
| hypoxia_3wks | -0.55 | -1.065 |
| hypoxia_6wks | 0.601 | -1.539 |
| glycerol | 0.298 | 1.147 |
| cholesterol | -0.435 | 0.823 |
| AJ | 0.277 | -0.904 |
| Bibs02 | -1.476 | -0.759 |
| Bibs02c | -1.206 | 0.27 |
| BL6 | 0.661 | 0.852 |
| BL6a | 0.0 | 0.917 |
| BXD01 | -0.085 | 0.56 |
| BXD010 | 0.596 | -0.669 |
| BXD011 | 0.069 | -0.044 |
| BXD03 | 0.69 | 1.047 |
| BXD04 | 0.851 | 0.586 |
| BXD05 | 0.073 | -0.491 |
| BXD06 | -0.205 | -0.554 |
| BXD07 | 0.48 | 0.114 |
| BXD08 | -0.204 | -0.17 |
| BXD09 | 0.328 | -0.049 |
| CAST | 0.259 | 0.622 |
| CCcont | 0.601 | 0.962 |
| DS01 | -1.145 | -0.168 |
| DS02 | 0.035 | -0.692 |
| DS04 | -0.464 | 0.19 |
| DS0c | -0.124 | 0.614 |
| GP01 | 0.513 | 0.58 |
| GP02 | -0.295 | -0.122 |
| GP0c | -0.211 | -0.413 |
| NOD | 0.088 | 0.076 |
| NZO | 0.978 | -0.777 |
| PWK | 0.567 | -0.25 |
| H37Rv_KO_CtpC | -0.405 | -0.717 |
| H37Rv_KO_CtpD | -0.278 | 1.605 |
| H37Rv_KO_Rv1272 | 0.139 | -1.375 |
| H37Rv_KO_SugABC | 1.05 | -0.292 |
| H37Rv_KO_MbtN | 0.73 | -0.598 |
| Trans05 | 0.137 | 0.087 |
| macrophage_unactivated | -0.098 | -0.713 |
| IL1 | 0.673 | -0.872 |
| Rapamycin | -0.77 | -1.513 |
| Tcell | -0.365 | -0.254 |
| GMCSF | -0.166 | -1.03 |
| IFNab | -0.438 | -0.683 |
| IFNg | 0.04 | -0.724 |
| IFNg_GMCSF1 | 0.952 | -0.924 |
| Rv1432_day32 | 0.348 | -2.109 |
| Rv1565c_day32 | 0.251 | 0.359 |
| secA2_input | 0.161 | -0.351 |
| delta_Rv3594 | 0.202 | -0.852 |
| delta_Rv3717 | 0.0 | -1.787 |
| delta_Rv3811 | -0.308 | -1.924 |
| delta_Rv0954 | -0.698 | -0.093 |
| PonA1 | 0.361 | 0.016 |
| EccD1_KO | 0.382 | 0.385 |
| EspI_KO | 0.0 | -0.482 |
| PE35_KO | 0.117 | -0.111 |
| PPE68_KO | -0.099 | -0.608 |
| glycerol2 | 0.0 | -4.603 |
| lignocerate | 0.128 | -4.506 |
| oleate | -2.325 | -2.48 |
| phosphatidylcholine | -1.02 | -5.472 |
| acetate | 1.794 | -0.206 |
| glucAc | 1.156 | -0.711 |
| Rv0950ko | 0.455 | 0.235 |
| Rv1096ko | -0.115 | -0.06 |
| Rv3684ko | -0.157 | -0.033 |
| delta_otsA_trehalose | -1.089 | 1.297 |